Gene Information

Name : Igag_0639 (Igag_0639)
Accession : YP_003859352.1
Strain : Ignisphaera aggregans DSM 17230
Genome accession: NC_014471
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 583119 - 583832 bp
Length : 714 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003395:IPR003439:IPR003593:IPR017871; KEGG: ate:Athe_0111 ABC transporter related; PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; SPTR: B5IR

DNA sequence :
ATGTCTTCTAATGATACTGTAATTATATTGAAGAATGTCTTTAAGAGTTATAGACAGAAGTCTATAGTGGTACATGCACT
CTCCGGAATCTCTCTAGAGATATATAGAGGTGAGATAGCATGTATCGTAGGTCCATCTGGATCTGGAAAAACAACACTGC
TTAACATAGTTGGTGGTCTAGATCGTGCTGATTCTGGTAGAGTGATAGTAGATGGAGTAGATATTACTGAGCTTGATGAG
GGTAAGCTAACAGAGTTTAGGCTAAGAAAAATAGGCTTTGTATTCCAGGCATTAAATCTAATTCCAATACTTACAGCTGT
AGAGAATGTAGAACTACCACTAGCGTTCATGGGTCTTTCCAAGAAGGAGAGAAGGGAGAGAGCACTAGAAGCTCTAGAAA
TGGTTAGACTAGGTGATAAAGCATATAGAAAACCTGATGAGCTTAGTGGTGGAGAACAACAGAGAGTAGCTATAGCAAGA
GCTCTTGTCACAAGACCATCAATAGTATTGATGGATGAACCAACAGCACATCTAGACTCAGAAACAGGGAGCGAGCTAAT
GAAACTAGTAAAGAGATTGAATAGCAAGCTCAAACAGACTTTCATCATAGCAACACACGACCCAATAGTTGTTAACTCCT
GTGAAAAGGTGATAAGAATTAGAGATGGAAAGATAATATCGATTGAAGGTGGAAGAAAATCCTTATCAAGTTAG

Protein sequence :
MSSNDTVIILKNVFKSYRQKSIVVHALSGISLEIYRGEIACIVGPSGSGKTTLLNIVGGLDRADSGRVIVDGVDITELDE
GKLTEFRLRKIGFVFQALNLIPILTAVENVELPLAFMGLSKKERRERALEALEMVRLGDKAYRKPDELSGGEQQRVAIAR
ALVTRPSIVLMDEPTAHLDSETGSELMKLVKRLNSKLKQTFIIATHDPIVVNSCEKVIRIRDGKIISIEGGRKSLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-19 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Igag_0639 YP_003859352.1 ABC transporter NC_012469.1.7686878. Protein 6e-40 47
Igag_0639 YP_003859352.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 45
Igag_0639 YP_003859352.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 44
Igag_0639 YP_003859352.1 ABC transporter CP001581.1.gene598.p Protein 4e-39 43