Gene Information

Name : Igag_1440 (Igag_1440)
Accession : YP_003860122.1
Strain : Ignisphaera aggregans DSM 17230
Genome accession: NC_014471
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1332813 - 1333514 bp
Length : 702 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: smr:Smar_1438 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3DPG8 ABC transporter related; PF

DNA sequence :
ATGTCTGTAAGAGATGTTGTAAAGATATATAGGGTAGGCAATGTTGTTACCTATGGTCTTAGAGGTGTAAACCTCAATAT
ATATCAAGGAGATTTTATAGCGATAATGGGACCATCAGGCTCTGGAAAAACAACACTTCTAAACATATTAGGCCTTCTTG
ATAAGCCTACTAAGGGTTCTGTATATATCGATGGTATTGATGTATCCAAGCTTAGTGATAGGGAATTAGCTAAGATAAGA
AATCTTAAGCTGGGGTTTGTATTTCAACACTTTAATCTAATTAATAGACTAACTGTTCTAGAGAATATAGAGATACCATT
GATAGCTAGAGGTATACCAAAACAGAAAAGAGTTGAATTAGCCAAAGAAGCATTACTAAAAGCTGGTGGTGAACTAAGCT
GGCTACCAAAGAAACCACTACAGCTATCAGGTGGTCAACAACAGAGAGTAGCTATAGCAAGAGCTATTGTAGGTTCTCCA
GAGATTATATTGGCTGACGAACCTACAGGTAATCTCGATGTTAATAGCTCAAAGATAGTTGTCAAAACATTTTTAGAACT
TAATAAACATGGACATACCATAGTAATGGTTACACACAATCCAGAGGTTGCACACTGTACACAGAAGATATATGTGATAA
GAGATGGAACTATTGTTAATATTGTTGATCCAGACCCGAGCAAGTGTATAGCATATACATAG

Protein sequence :
MSVRDVVKIYRVGNVVTYGLRGVNLNIYQGDFIAIMGPSGSGKTTLLNILGLLDKPTKGSVYIDGIDVSKLSDRELAKIR
NLKLGFVFQHFNLINRLTVLENIEIPLIARGIPKQKRVELAKEALLKAGGELSWLPKKPLQLSGGQQQRVAIARAIVGSP
EIILADEPTGNLDVNSSKIVVKTFLELNKHGHTIVMVTHNPEVAHCTQKIYVIRDGTIVNIVDPDPSKCIAYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Igag_1440 YP_003860122.1 ABC transporter NC_012469.1.7686878. Protein 3e-50 49
Igag_1440 YP_003860122.1 ABC transporter CP001581.1.gene598.p Protein 8e-31 45
Igag_1440 YP_003860122.1 ABC transporter NC_008702.1.4606598. Protein 1e-34 43
Igag_1440 YP_003860122.1 ABC transporter CP001581.1.gene798.p Protein 5e-35 41