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Name : smpB (MHR_0256) Accession : YP_003856262.1 Strain : Mycoplasma hyorhinis HUB-1 Genome accession: NC_014448 Putative virulence/resistance : Unknown Product : Trans-translation protein, binds tmRNA and tRNA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 327487 - 327924 bp Length : 438 bp Strand : - Note : - DNA sequence : ATGAAAATAATAGCAAAAAATAAAGTTGCATACTATGATTATGAAATTTTAGAGACTTTTGAAGCAGGTATTAGTTTAAT GGGTTGAGAAGTAAAATCCATTAGAGCAAATAAAGTGAATTTAAAAAATTCTTTTGCTTATTTTAAAGATTTAGAACTTT ATTGATCAAATGCACATATTTCTTTATACATGGCAGTTAAAGGTGATGAACAAAGAACAAGAAAACTCCTTATGCACAAA AGTGAATTGAAAAAAATTCATTTTAAAAAAACTACAAATAGACTTACTTTAATCCCTTTATCCTTGTACTGAAAGCAAGG AAAAATTAAACTAGAATTAGCGCTTGCAAAAGGTAAAACTAAATACGACAAACGTCAAAGCGAAAAAGCTAAAGAGGAAA AAAGAAAAATTGAAAAGATGTTAAAAAATTATTCTTAA Protein sequence : MKIIAKNKVAYYDYEILETFEAGISLMGWEVKSIRANKVNLKNSFAYFKDLELYWSNAHISLYMAVKGDEQRTRKLLMHK SELKKIHFKKTTNRLTLIPLSLYWKQGKIKLELALAKGKTKYDKRQSEKAKEEKRKIEKMLKNYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-18 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-15 | 41 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-17 | 41 |
