Gene Information

Name : PB2503_03012 (PB2503_03012)
Accession : YP_003853820.1
Strain : Parvularcula bermudensis HTCC2503
Genome accession: NC_014414
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 535461 - 536435 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence :
ATGTCCTTCAAGCCATTGCGGATCGCCTCCCGACGCTCCCCCCTTGCGGTGGCCCAGGCGCTGTGGGTGCGGGATCGCCT
AGCCGAGGCGCTCGGCATTGACGAGGTCGACCGCGACGCGGCCTTTCCCCACGAGACCTTTGTGACCACGGGCGACAGAA
TGCTCAATCCGACCCTGGCCGATATCGGCGGCAAGGGCCTCTTCACGAAGGAAATCGAGATCGCGCTCCTCGACGGGCAA
GCGGATATCGCGGTTCATTCGATGAAGGACATGCCCGCGCAGATGCCGCCGGGCCTGGTCTTGGCGGCGGTGCCGGTGCG
GGAGGATCCGCGCGACGCCTTTGTGACCCTCGATGGGCGCCCCCTCGACCAGATGCCGGCCGGGGCCCGGATTGGGACCA
GTTCGACCCGGCGCCGCGCGCAATTGGCCCGATTGCGGCCAGACCTCGCGCTGGTCCCCATGCGCGGCAATGTCGGCACC
CGACTGCAAAAGCTCGCAGCCGGCGAAGCCGAAGGGACCTTTCTCGCCGAAGCGGGGCTCCGACGCCTCGGCATGACCGA
TGTCAAGCGCGAAGCCCTCTCCCCCGCCCGCATGTTGCCCGCCCTCGGCCAGGGTGCCTTGTGCGTTCAGGCCCGATCGG
GGGACCACGAGACGCTGTCGGCCTGTGCCCACATCAATAACCGCCCCACCGCCCTGGCGGCCGCGGCGGAACGGGCGCTG
ATCTCGGGGCTCGACGGATCGTGCAAGACCCCGATCGGCGGTCTCGCCCGGCAAACCGGCGACAGTCTGATCCTTGAGGG
TCAGATCCTCACCCCCGATGGGCGGCGCGTGCTGCGCGGTGAGCGGACCGTCGCCATTGGCGGGATGACATGGGAAGCGG
TGCTCGACAGCGCCCGGGCGGCGGGGGCGGATCTTGCCGCTTATATGCGGGCCGAAGCGGGGGCGGATTTGGCGGCTATG
CTCGGCGACCAATGA

Protein sequence :
MSFKPLRIASRRSPLAVAQALWVRDRLAEALGIDEVDRDAAFPHETFVTTGDRMLNPTLADIGGKGLFTKEIEIALLDGQ
ADIAVHSMKDMPAQMPPGLVLAAVPVREDPRDAFVTLDGRPLDQMPAGARIGTSSTRRRAQLARLRPDLALVPMRGNVGT
RLQKLAAGEAEGTFLAEAGLRRLGMTDVKREALSPARMLPALGQGALCVQARSGDHETLSACAHINNRPTALAAAAERAL
ISGLDGSCKTPIGGLARQTGDSLILEGQILTPDGRRVLRGERTVAIGGMTWEAVLDSARAAGADLAAYMRAEAGADLAAM
LGDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-49 46
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-49 46