Gene Information

Name : PB2503_00485 (PB2503_00485)
Accession : YP_003856006.1
Strain : Parvularcula bermudensis HTCC2503
Genome accession: NC_014414
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2900385 - 2901059 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTCTTGATAATCGAAGATGACCACAAGATGGCGCACTATCTAGGTGACGGCTTGACTCGAGAGGGCCATCAGAT
TCAAGCCATCTCTACCGGGCCCGACGGGCTAGAGATGGCGCTGGCGCAGGACTTTGACGTCGTGGTGCTGGACCGGATGT
TGCCTGGACTTGATGGCCTTTCTCTCTTGAAGCGCTTACGTGCGGCAGGTCGCAAAATGCCTGTTCTGCTTCTAACGGCG
ATGGGCGGTCTCGATGACCGAGTGGAAGGACTTGATGCGGGGGCGGATGATTACTTGGTCAAGCCTTTCGCATTTTCCGA
AGCATATGCACGGCTCAATGCACTCGTTCGGCGCCCTCCAATTGCCGGCAATCCCACCACGTTGACGGCTGCTGATCTTC
ACATGGATCTCATCGCCCGAACGGTTTCGCGCGGCGGCGTTTCCCTCGATCTCGGACCGAAGGAGTTTCTGCTTCTTGAA
ATTCTACTCCGGAATAAGAACCGTGTCATGACGAAAACAATGCTGCTTGAACGTGTTTGGAGTTTTCATTTCGACCCTCA
GACGTCTTTGGTGGAAACCCATATCAGCCGCCTCCGGGCCAAAATCGATCGACCCTTCGCGTCCGCGCTCGTCGAGACCG
TTAGGGGAGCAGGCTATGTCATCAGGGCATCCTGA

Protein sequence : 
MRVLIIEDDHKMAHYLGDGLTREGHQIQAISTGPDGLEMALAQDFDVVVLDRMLPGLDGLSLLKRLRAAGRKMPVLLLTA
MGGLDDRVEGLDAGADDYLVKPFAFSEAYARLNALVRRPPIAGNPTTLTAADLHMDLIARTVSRGGVSLDLGPKEFLLLE
ILLRNKNRVMTKTMLLERVWSFHFDPQTSLVETHISRLRAKIDRPFASALVETVRGAGYVIRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-42 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PB2503_00485 YP_003856006.1 two-component response regulator BAC0083 Protein 6e-51 47
PB2503_00485 YP_003856006.1 two-component response regulator BAC0638 Protein 5e-45 46
PB2503_00485 YP_003856006.1 two-component response regulator BAC0125 Protein 7e-47 44
PB2503_00485 YP_003856006.1 two-component response regulator BAC0347 Protein 3e-47 44
PB2503_00485 YP_003856006.1 two-component response regulator BAC0308 Protein 7e-47 44
PB2503_00485 YP_003856006.1 two-component response regulator BAC0197 Protein 3e-43 44
PB2503_00485 YP_003856006.1 two-component response regulator BAC0111 Protein 5e-51 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PB2503_00485 YP_003856006.1 two-component response regulator VFG0596 Protein 8e-43 44
PB2503_00485 YP_003856006.1 two-component response regulator VFG1390 Protein 1e-39 41