|
Name : PB2503_01377 (PB2503_01377) Accession : YP_003853495.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 188230 - 190335 bp Length : 2106 bp Strand : + Note : - DNA sequence : ATGCGCCCCGCCGAACTCAACCGATACTTTGCCGATCTCACCTCATTACCGGGCGTTGGGCCGAAGACGGCCGCCCTTTT ACAAAAAGTGGCCGGCCCACGGATCATCGATTTGCTCCTGACCGGCCCCACCGGGCTGATTGATCGCAGCTATCGTCCCA AGGTTGGGGAGGCGATCCTCGGGCGGGTCGCGACGGTGACGGTGACCGTCACGGCGCACACACCGCCGCCGACCGGGCGC CGCTTGATCCCCTATCGCATCCTCACCGCCGACGACACGGGCTATCTCACGCTGGTCTTCTTTCGGGCAAAGCGCGAATG GCTGGAAACCCGCTATCCGGTGGGCACGAGCCTGACGGTCAGTGGGACGATCGACGACTATGGCGGCGCCCGGCAAATGA CGCACCCAGATTATATGCTGCGCCCAGACCACGATGAGACGCTGCCCGAGGTTGAGCCGGTCTATCCATTGACCGCAGGC CTCACCCTCCCGACCTATCGGCGGGCGGTGGCCGCGGCGTTGAGGCGGGTGGCGCCCTTGGCCGAATGGCGGGCACCGCC GCTTGAGGGCGATGGCGCGCCTCCCCTCCCCGACTGGGCCGACGCCGTTCGCACCCTGCACGCGCCCCAGTCCGAGCGGG ACCTGTCCCCCTCCTCCCCGGCGCGCCGCCGTCTCGCCGCGGACGAATTGCTGTCGAACCAGCTAGCGCTCAGCTTGATC CGCCATCGGCGCCAGCAAATTGCGGGACGCGCGCTGCCCGGCGATCCGACATTGATGGAAGGTGGGCGGGCCGCCCTGCC GTTTCGCCTTACCGCCGCGCAGGATCAGGCCCTCGCGGAGATCGTTGCCGATATGCAGTCACCCGCTCGCATGGTTCGCC TGCTCCAGGGGGATGTGGGCTCTGGCAAAACCATGGTGGCCTTTTTCGCGCTCCTCCAGGCCATCGGCTCGGGGGTACAG GGCGCCCTGATGGCGCCGACGGAGATCCTGGCCCTTCAGCACGAGGAGACCCTCCGCCCCCTCTGCGATCGCCTGGGCCT GTCGCTTGTCACGCTGCTCGGCCGCGATAAGGGACCGGAACGGGCAGCCAAGCGCCGGGGGGTTGCCGAAGGCTATGTCC CCCTCGTGATCGGCACCCACGCCCTTTTGTCCGAGGACGTTGTTTTTCGCGACCTGGGCCTGATCGTTGTCGACGAGCAG CACCGATTTGGGGTCACCCAGCGATTGAGCCTTCAGGAAAAAGGGCGGCGGGCGGATATTTTAGTGATGACGGCCACGCC AATCCCCCGCAGCCTCGCACTGACCACTTACGGCGATATGAGTGTCAGCCAGATACGGGAAAAACCCCCCGGACGGAAAC CCGTTGCCACCCGTGCCCTTCCCACCACGCGCCTCGATGAGGTGATGTCAGCCATAGGGCGCGCTGCCGCCCGCGGAGAC CAAATCTATTGGGTATGTCCCTTGGTCGAGGAGAACGACCAATTGGCCCTGACCTCCGTCACCGAGCGAGCCGCGTCTTT GGCAGACGCAACCGGCCTCGACATCGCTGCGGTACACGGACGAATGTCTCCGCAGGAGAAGGATGCCGTGGTCGCCCGCT TCGCGCGTGGGGACGCCGATGTCCTGGTGGCCACGACCGTGATTGAGGTGGGGGTGAACACGCCAAATGCCACGATCATG GTCATCGAACATGCCGAACGGTTCGGCCTCGCCCAGCTTCACCAATTACGGGGACGGGTTGGCCGCGGGGACAAGCCCTC AAGCTGTCTGCTTCTTTACAGCACCGGCGACGGGGAGCAGCTCGGCAAAACGGCAAAGGCACGGCTTAACACGCTGCGGG AAACCGAGGATGGGTTTGTGATCGCCGAAGCGGATCTCGCCCTTCGCGGCCCCGGCGATGCGTTGGGGACGGCACAATCT GGGCAAGCGCGCTTTCGGTTCGGCGATCTTTCCGCGCACAAGGATGTGCTGGAATGGGCCCATCAAGAAGCAGCGGACAT CGTCCGTCATGACCCCTATCTCGACACGAAAAGAGGAGCGGCCCTGAGGACGCTCCTCTATCTATTCGGTCAGGACGAGG CCGCCCGCCGCCTGCGGTCCGGCTGA Protein sequence : MRPAELNRYFADLTSLPGVGPKTAALLQKVAGPRIIDLLLTGPTGLIDRSYRPKVGEAILGRVATVTVTVTAHTPPPTGR RLIPYRILTADDTGYLTLVFFRAKREWLETRYPVGTSLTVSGTIDDYGGARQMTHPDYMLRPDHDETLPEVEPVYPLTAG LTLPTYRRAVAAALRRVAPLAEWRAPPLEGDGAPPLPDWADAVRTLHAPQSERDLSPSSPARRRLAADELLSNQLALSLI RHRRQQIAGRALPGDPTLMEGGRAALPFRLTAAQDQALAEIVADMQSPARMVRLLQGDVGSGKTMVAFFALLQAIGSGVQ GALMAPTEILALQHEETLRPLCDRLGLSLVTLLGRDKGPERAAKRRGVAEGYVPLVIGTHALLSEDVVFRDLGLIVVDEQ HRFGVTQRLSLQEKGRRADILVMTATPIPRSLALTTYGDMSVSQIREKPPGRKPVATRALPTTRLDEVMSAIGRAAARGD QIYWVCPLVEENDQLALTSVTERAASLADATGLDIAAVHGRMSPQEKDAVVARFARGDADVLVATTVIEVGVNTPNATIM VIEHAERFGLAQLHQLRGRVGRGDKPSSCLLLYSTGDGEQLGKTAKARLNTLRETEDGFVIAEADLALRGPGDALGTAQS GQARFRFGDLSAHKDVLEWAHQEAADIVRHDPYLDTKRGAALRTLLYLFGQDEAARRLRSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-136 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PB2503_01377 | YP_003853495.1 | ATP-dependent DNA helicase | BAC0356 | Protein | 4e-84 | 43 |
