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Name : PB2503_08934 (PB2503_08934) Accession : YP_003854982.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Unknown Product : 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1779059 - 1780471 bp Length : 1413 bp Strand : + Note : - DNA sequence : ATGTCCCAGTCCTTCGACGTCGTAGTCATTGGGGGGGGACCTGGCGGGTATAATGCCGCCATACGGGCCGCGCAGTTGGG CCTCTCGGTGGCGTGTATCGAAAAGCGCCCCAGCGGGCGGTTCGGCGGCACTTGCCTCAATGTCGGCTGTATTCCTTCAA AAGCGATGCTCCATGCTTCCGAGGCCTACGCTCATGCGAAATCCCATCTGAAGGAGTTGGGCGTCAAGGTCTCCGGCGTG GAACTCGATCTTCCCGCCATGCTCGGCCAAAAGGATGACGCGGTTCAGGGGCTTACGGACGGGATCGCGTATCTCTTCAA AAAGAACAAAGTCACGGGCCTTAAGGGGCATGGGCGGATCGAAGGCCCTGGCAAGGTCATTTTGACCGACGAGGACGGTA AGGAAGAACCGCTGAGCGCCTCGACGATCGTCATCGCCACCGGCTCGTCGGTCATGTCACTGCCGAATGTCGAGATCGAC GAAGACGTGATCGTCTCCTCTACCGGGGCCCTTGAGTTGAAAAAGGTGCCCGACCACATGGTCGTGGTGGGGGGCGGCTA TATCGGGCTTGAAATGGGCTCGGTGTGGCGCCGCCTTGGGGCCAAGGTGACCGTGGTCGAATATCTCGACCGCATCACGC CGGGTATGGACGGTGAAGTTTCCAAACAATTCATGCGTATCCTGAAGAAACAGGGAATGGAATTCAAGCTCGGCACGAAG GTGACGGGGATCGAGAAAACAAAGCAAGGGGCCACCCTGTCCCTGGAACCCGCCGCCGGCGGGGAAAAAGAGACCTTGGA AGCCGATGTCGTCCTGATTGCGATTGGGCGGAAGCCGCATACTGAAGGGTTGGGGCTCGACACTGTCGGCATCAAGACCA ATGACCGGGGGTTCATTCCGGTGGACGATCATTACCAGACCGGTGTCGATGGCATCTATGCCATCGGCGATGTCACCCCC GGTCCGATGCTGGCCCACAAGGCTGAGGACGAAGCCGTCGCGGTGGCCGAAATCATCGCCGGCAAAGGCGGTCACGTGAA TTACGATGTGATCCCCGGCGTGGTCTATACCGATCCCGAAGTCGCCATGGTCGGCAAGACCGAGGAGCAATTGAAGGATG AGGGGGTCGCCTACAAGGTGGGGAAATTCCCCTTTACCGCGAATAGTCGGGCCAAGACGAATCACGAAACGGACGGCTTT GTGAAAGTGCTGGCGGATGCCGAAACCGACAAGGTTCTCGGTGTTCATATGATCGGCACCGGGGTCGGCGAAATGATCGC CGAAGCCTGTCTTGTGATGGAGTTCGGCGGCTCTTCGGAGGATATCGCCCGCACCTGCCATCCTCATCCGACCCGTACCG AAGCGCTGCGTCAGGCGGCGATGGGGGTCGAGGGCTGGACGATGCAAGCCTAG Protein sequence : MSQSFDVVVIGGGPGGYNAAIRAAQLGLSVACIEKRPSGRFGGTCLNVGCIPSKAMLHASEAYAHAKSHLKELGVKVSGV ELDLPAMLGQKDDAVQGLTDGIAYLFKKNKVTGLKGHGRIEGPGKVILTDEDGKEEPLSASTIVIATGSSVMSLPNVEID EDVIVSSTGALELKKVPDHMVVVGGGYIGLEMGSVWRRLGAKVTVVEYLDRITPGMDGEVSKQFMRILKKQGMEFKLGTK VTGIEKTKQGATLSLEPAAGGEKETLEADVVLIAIGRKPHTEGLGLDTVGIKTNDRGFIPVDDHYQTGVDGIYAIGDVTP GPMLAHKAEDEAVAVAEIIAGKGGHVNYDVIPGVVYTDPEVAMVGKTEEQLKDEGVAYKVGKFPFTANSRAKTNHETDGF VKVLADAETDKVLGVHMIGTGVGEMIAEACLVMEFGGSSEDIARTCHPHPTRTEALRQAAMGVEGWTMQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-71 | 43 |
