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Name : PB2503_08444 (PB2503_08444) Accession : YP_003854886.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1673520 - 1674503 bp Length : 984 bp Strand : - Note : - DNA sequence : ATGCCCACAAACGTTTCTGCATCGGATACCATCGCAACAGGCCGCGCCGTTCTCACCACGGAGGCGAACGCGCTCCACAC GCTCGGGGAGCAGCTCGACGACGCCTTCGCGGCAGCCGTGCGTCACCTTACAGCGACATCGGGCTTTACCGTGGTGACCG GGGTCGGAAAGTCAGGTCACATCGGCCGAAAAATGGCCGCGACCTTTGCCTCGACGGGAACACCATCGTTCTTTGTCCAC CCAACAGAGGCCAGCCACGGCGATCTGGGCATGCTCGACCCCAAGGGCGTGCTGATTGCGATTTCCAATTCCGGCGAGAC CCGCGAATTGCGCGACATTCTGCTCTATGCCAATCGGCGGCATGTACCGCTCATTGCCATGACGGCCAGGCCCGACAGCT TTTTGGCGAAACGGGCGGAGGTCACCCTGCTGCTCCCTCGCACCCCGGAGGCCTGCCCCAATGGCCTTGCGCCCACCAGT TCGACGACCATGACTCTCGCCCTGGGGGATGCGCTTGCCGTTGCGGCAATGACCGCCCGCGGATTCAGTAAAGAGGATTT CGGCGCCCGGCATCCCGGCGGGCGCCTGGGGATGCAACTTCAGCGGATCGAGGAATATCTTGGCCTTCAGGCAGGGCGCA CGATCCCCACACTCCCCTCGGCGGCCCCGCTCACCGATGTGCTCCAAAAAATTTCCGAAGGGCGAGTCGGCGCGGTGGCC GTGGTCGACGCGGCGGGTCTTCTTGAAGGCATTGTCACGGATGGCGACGTGCGCCGCGGTATTATGGGGTACACGGACGT CCAAAGCCTAACGGCGGCCGACCTCATGTCTCGCTCACCGATCACCATCGCCCCGCATCAGAGGGTGTCGAGCGCGGTCG AAATTTTTGAGACCCGCGCGATCTCCCAAATTCTCGTCATTGCCGAGGGTCAACCAATCGGCGTCGTGCATATCAAGGAT TTGATGGCGGACGGCTACCTTTGA Protein sequence : MPTNVSASDTIATGRAVLTTEANALHTLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGRKMAATFASTGTPSFFVH PTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVPLIAMTARPDSFLAKRAEVTLLLPRTPEACPNGLAPTS STTMTLALGDALAVAAMTARGFSKEDFGARHPGGRLGMQLQRIEEYLGLQAGRTIPTLPSAAPLTDVLQKISEGRVGAVA VVDAAGLLEGIVTDGDVRRGIMGYTDVQSLTAADLMSRSPITIAPHQRVSSAVEIFETRAISQILVIAEGQPIGVVHIKD LMADGYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-43 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-43 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-43 | 42 |
