Gene Information

Name : PB2503_08444 (PB2503_08444)
Accession : YP_003854886.1
Strain : Parvularcula bermudensis HTCC2503
Genome accession: NC_014414
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 1673520 - 1674503 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
ATGCCCACAAACGTTTCTGCATCGGATACCATCGCAACAGGCCGCGCCGTTCTCACCACGGAGGCGAACGCGCTCCACAC
GCTCGGGGAGCAGCTCGACGACGCCTTCGCGGCAGCCGTGCGTCACCTTACAGCGACATCGGGCTTTACCGTGGTGACCG
GGGTCGGAAAGTCAGGTCACATCGGCCGAAAAATGGCCGCGACCTTTGCCTCGACGGGAACACCATCGTTCTTTGTCCAC
CCAACAGAGGCCAGCCACGGCGATCTGGGCATGCTCGACCCCAAGGGCGTGCTGATTGCGATTTCCAATTCCGGCGAGAC
CCGCGAATTGCGCGACATTCTGCTCTATGCCAATCGGCGGCATGTACCGCTCATTGCCATGACGGCCAGGCCCGACAGCT
TTTTGGCGAAACGGGCGGAGGTCACCCTGCTGCTCCCTCGCACCCCGGAGGCCTGCCCCAATGGCCTTGCGCCCACCAGT
TCGACGACCATGACTCTCGCCCTGGGGGATGCGCTTGCCGTTGCGGCAATGACCGCCCGCGGATTCAGTAAAGAGGATTT
CGGCGCCCGGCATCCCGGCGGGCGCCTGGGGATGCAACTTCAGCGGATCGAGGAATATCTTGGCCTTCAGGCAGGGCGCA
CGATCCCCACACTCCCCTCGGCGGCCCCGCTCACCGATGTGCTCCAAAAAATTTCCGAAGGGCGAGTCGGCGCGGTGGCC
GTGGTCGACGCGGCGGGTCTTCTTGAAGGCATTGTCACGGATGGCGACGTGCGCCGCGGTATTATGGGGTACACGGACGT
CCAAAGCCTAACGGCGGCCGACCTCATGTCTCGCTCACCGATCACCATCGCCCCGCATCAGAGGGTGTCGAGCGCGGTCG
AAATTTTTGAGACCCGCGCGATCTCCCAAATTCTCGTCATTGCCGAGGGTCAACCAATCGGCGTCGTGCATATCAAGGAT
TTGATGGCGGACGGCTACCTTTGA

Protein sequence :
MPTNVSASDTIATGRAVLTTEANALHTLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGRKMAATFASTGTPSFFVH
PTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVPLIAMTARPDSFLAKRAEVTLLLPRTPEACPNGLAPTS
STTMTLALGDALAVAAMTARGFSKEDFGARHPGGRLGMQLQRIEEYLGLQAGRTIPTLPSAAPLTDVLQKISEGRVGAVA
VVDAAGLLEGIVTDGDVRRGIMGYTDVQSLTAADLMSRSPITIAPHQRVSSAVEIFETRAISQILVIAEGQPIGVVHIKD
LMADGYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-43 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-43 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-43 42