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Name : PB2503_07364 (PB2503_07364) Accession : YP_003854672.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Unknown Product : ABC oligopeptide transporter, fused ATPase subunits Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1440727 - 1442355 bp Length : 1629 bp Strand : + Note : - DNA sequence : ATGAGCTCGACTTCGTCCCCATCGCCCCTGCTGGATATCCAGAACCTGACCGTGGATTTCGACACCCCGGATGGCACCGT GCACGCCGTCAAATCGGTGTCCCTGTCTGTCGCGCCCGGAGAGGTCGTGGCCATTGTCGGTGAGAGTGGTTCGGGAAAAA GCCAAATCGCCATGACCACGCTTGGACTGTTGGCGTCCAATGGAACGGCGTCCGGCCACATTTTATTCCACGATCAGGAC CTCCTCAGCCTCTCGAAAAAGAAGATGAACGATATTCGTGGGGTGAAGATTTCTATGATCTTCCAGGAGCCGATGACGTC ACTCGACCCTCTTTATTCTATCGGTGATCAGATCATCGAACCGTTGATGGTCCACAAACGGATCGTCCGCCGCGAGGCAC AGGCCAAGGCACTCGATCTGTTACGACTTGTGCAAATCCCGGACCCGGAGCGCCGGATGAAGTCCTATCCCACCGAACTG TCCGGCGGCCAACGACAACGGGTGATGATCGCCATGGCGCTGGCGAACGCGCCTGACATGCTCATTGCGGACGAGCCAAC CACGGCCCTCGACGTGACGACCCAGGCAGAGATTCTCAAGCTCCTGGCGTCGCTCAACCGAGAGCTTGGGATGAGTATCA TCTTCATTACCCATGATTTGGGCATCGTCGAGGCGTTCGCCGATCGTGTCTTCGTGATGCGGCAAGGGCAGCTGCTGGAA GAGGGTAAAACGGTCGATGTCTTTGAAAGTCCGAAGACAGACTATACAAGAACATTGCTGGCAGCCGAGCCGGACGGCAC AAAGAGACCTGTCGATGACAGCGTCGAGGTCGTTCTGGAGGCGAAGGGCGTCCATGTGAGCTATGGCGATTCGCCCGGAT TGTTCCGTAAGGATACGCGGTTTCATGCGGTGCGCGGGGTCGACCTTCGGCTGCGGGAAGGGCAGACCGTCGGGCTCGTC GGAGAGAGTGGATCGGGCAAATCCACGCTTGGGCGTGCCCTTTTGCGCCTCACGAACTGTGAGGGCCAGATCACCTATCT GGGGCGTGATCTGCTGGCGATCTCCCCACAAGAGATGAAGCCTTTACGGCGAGAGTTACAGATGGTGTTTCAGGATCCCT ATGGATCTCTCTCACCACGGATGACCGTTCTCGACATTGTCGAGGAGGGCTTGCGAACCCATGCCGGCCATTTGTCGAAA GCGGACCGCGATGCTCAGGCTCTCGATGCCCTCGAGAAGGTGGGCCTCGACGCCAATGTGAGAAACCGATTCCCGCACGA ATTTTCCGGCGGGCAGCGTCAGCGGATCGCGATCGCCCGCGCCATGGTCCTAAAGCCGAAAATAGTGGTCCTCGATGAGC CGACCTCCGCCCTTGACCGAACGGTCCAGAAGGAGATGATCGAACTCCTCCGAACGATTCAGTCCGAATTTTTGCTCTCC TACATCTTCATTAGTCACGATCTGGCCGTGGTGAAGGCAATGGCCGATTATGTCATGGTGATGCGAGATGGCGAGATCGT CGAAGAGGGGATGACGCAGCAGATTTTTGAAGATCCGCACCATGAATATACGAAGAGTTTGATTGCCAGTTCCTTTACTC TCAAGGATATGCTCACCAATCCAGCCTAG Protein sequence : MSSTSSPSPLLDIQNLTVDFDTPDGTVHAVKSVSLSVAPGEVVAIVGESGSGKSQIAMTTLGLLASNGTASGHILFHDQD LLSLSKKKMNDIRGVKISMIFQEPMTSLDPLYSIGDQIIEPLMVHKRIVRREAQAKALDLLRLVQIPDPERRMKSYPTEL SGGQRQRVMIAMALANAPDMLIADEPTTALDVTTQAEILKLLASLNRELGMSIIFITHDLGIVEAFADRVFVMRQGQLLE EGKTVDVFESPKTDYTRTLLAAEPDGTKRPVDDSVEVVLEAKGVHVSYGDSPGLFRKDTRFHAVRGVDLRLREGQTVGLV GESGSGKSTLGRALLRLTNCEGQITYLGRDLLAISPQEMKPLRRELQMVFQDPYGSLSPRMTVLDIVEEGLRTHAGHLSK ADRDAQALDALEKVGLDANVRNRFPHEFSGGQRQRIAIARAMVLKPKIVVLDEPTSALDRTVQKEMIELLRTIQSEFLLS YIFISHDLAVVKAMADYVMVMRDGEIVEEGMTQQIFEDPHHEYTKSLIASSFTLKDMLTNPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-82 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-82 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-82 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-82 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-102 | 41 |
