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Name : PB2503_01092 (PB2503_01092) Accession : YP_003853439.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 121803 - 123080 bp Length : 1278 bp Strand : - Note : - DNA sequence : ATGCACGATATTCGGGCCATTAAGGACGATCCCGACGGGTTCGATGCGGCGATGTCGCGCCGCGGGGTTGCCATCAAAGC GGCGGATCTGATCGCCCTTGATGAGCGGCGGGTGGCCAATACCAAAGCAATGAACGAGGCCCAGGCCGCCCAGAAACAGG CGTCAAAGGCAATCGGGCAAGCCATGGGGGCGGGCGACCAGGCGAAGGCCGAAGCGCTCAAGGCGGAGGTCGCCGCCCTC AAAGCCAGCGTTCAGGAGCGTGAAGCCGACGACAGGCGGTTGTCCGATGAGTTGCGGGCGGCCTTGCTGCCCATCCCCAA TCGCCTGGCGCCCGATGTGCCCGACGGGGAGAGCGAAGACGACAATGTCGAGATCCGCCGGTGGGGCACCCCGCCGGATA TCGCAACCCCGCAGGATCACGTCGATCTTGGCGAGGGACTTGGTCAGATGGATTTCGAGACGGCCGCCAAGATATCCGGG TCGCGATTTGCCCTCTTAACGGGGGATCTCGCCCGATTGGAGCGGGCCCTCGCCACCTTCATGCTCGATTTGCACCGCCA TGAGTTCGGCTACATCGAGGTCAGCCCGCCGGTTCTCGTGCGGGACGACGCGTTGGTTGGCACGGGGCAATTGCCGAAAT TCGAGGAAGACCTCTTCAAAACCACCTCGGGGCATTACCTGACCCCCACCGCCGAGGTTCCGCTCACCAATCTTGTCCGG GACAGCTTGCTTGAGGAAGACAGCTTGCCGCGCCGATATACGGCGTACACGCCCTGTTTCCGCTCCGAAGCCGGATCGGC CGGGCGTGACACCCGCGGCATGATCAGGCTCCACCAATTCAGCAAGGTCGAACTGGTCTCGATTACGACCCCAGAGGAGG GCCATCAGGAACATGAGCGGATGACACAGGCGGCTGAGACGGTTCTCCAGCGCCTCGATCTGCCCTATCGGGTCGTCACG CTCTGCGCCGGCGATATCGGCTTCGGCGCCCTCAAGACCTATGATCTTGAGGTCTGGCTGCCCGCTCAGAATACCTATCG AGAGATTTCCTCCTGCTCCTATGTTGGCGACTTTCAGGCGCGACGCATGAATGCCCGGTTCCGGCGGGAGGGGGAGAAAA AGCCGCTTTACGTGCATACCCTCAACGGGTCGGGGCTGGCAGTGGGACGGACCTTGGTCGCCGTCCTTGAAAATTATCAG GAGGCCGACGGGGCCATTCGTGTGCCCGACGCGCTTCAACCCTATATCGGTCAGAGCCGAATAGAGAGAGCGTCATGA Protein sequence : MHDIRAIKDDPDGFDAAMSRRGVAIKAADLIALDERRVANTKAMNEAQAAQKQASKAIGQAMGAGDQAKAEALKAEVAAL KASVQEREADDRRLSDELRAALLPIPNRLAPDVPDGESEDDNVEIRRWGTPPDIATPQDHVDLGEGLGQMDFETAAKISG SRFALLTGDLARLERALATFMLDLHRHEFGYIEVSPPVLVRDDALVGTGQLPKFEEDLFKTTSGHYLTPTAEVPLTNLVR DSLLEEDSLPRRYTAYTPCFRSEAGSAGRDTRGMIRLHQFSKVELVSITTPEEGHQEHERMTQAAETVLQRLDLPYRVVT LCAGDIGFGALKTYDLEVWLPAQNTYREISSCSYVGDFQARRMNARFRREGEKKPLYVHTLNGSGLAVGRTLVAVLENYQ EADGAIRVPDALQPYIGQSRIERAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-88 | 58 |
