|
Name : PB2503_00542 (PB2503_00542) Accession : YP_003853330.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Unknown Product : IS 426 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 5347 - 5736 bp Length : 390 bp Strand : + Note : - DNA sequence : ATGTCTGACGATTATCGCCGGATCGAAGTGATCACGGGAACGGCGCGGCGGCGCTACTGGTCCGCCGACGAGAAGCTGTC GATTGTGGAGGAGACCCTGCAGCCGGGACAGACGGTTTCGTTGGTCGCCCGTCGGCATGGCATGGCGCCGAACCTGGTCT ATCGTTGGCGCCGCTTGATGAAGGAAGGGGGAGCGGTCGCCGTGGGATCGGATCAGAACGTCGTCGGCGAAGTGGCCGTC AAAAAGCTCGAGGCCCGCGTGCGCGAGCTCGAACGGATGCTGGGCAAGAAGACGATGGAGGTCGAGATCCTTCGTGAGGC CCTCGACCAGGCGCGGTCAAAAAAACCGATCTTGCAGCTGCAATCGTATCCGCAGGACGGTTCCCGATGA Protein sequence : MSDDYRRIEVITGTARRRYWSADEKLSIVEETLQPGQTVSLVARRHGMAPNLVYRWRRLMKEGGAVAVGSDQNVVGEVAV KKLEARVRELERMLGKKTMEVEILREALDQARSKKPILQLQSYPQDGSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| insC | YP_854262.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 8e-14 | 43 |
| c5196 | NP_757044.1 | transposase insC | Not tested | PAI II CFT073 | Protein | 8e-14 | 43 |
| insC | AAZ04431.1 | IS2 conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 5e-14 | 43 |
| aec50 | AAW51733.1 | Aec50 | Not tested | AGI-3 | Protein | 3e-18 | 43 |
| tnpG | AAD44740.1 | TnpG | Not tested | SHI-2 | Protein | 2e-18 | 42 |
| unnamed | AAL57520.1 | IS2 transposase | Not tested | LEE | Protein | 2e-18 | 42 |
| st02 | CAC81840.1 | ST02 protein | Not tested | LEE II | Protein | 2e-18 | 42 |
| ECO26_5247 | YP_003232129.1 | insertion sequence 2 OrfA protein | Not tested | LEE | Protein | 4e-18 | 42 |
| S3188 | NP_838471.2 | insertion sequence 2 OrfA protein | Not tested | SHI-1 | Protein | 4e-18 | 42 |
| S4060 | NP_839229.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 4e-18 | 42 |
| SF2984 | NP_708758.3 | IS2 ORF1 | Not tested | SHI-1 | Protein | 5e-18 | 42 |
| S4049 | NP_839217.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 1e-17 | 41 |
| SF3709 | NP_709448.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 2e-17 | 41 |
| SF3722 | NP_709461.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 2e-17 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PB2503_00542 | YP_003853330.1 | IS 426 transposase | VFG0648 | Protein | 1e-18 | 42 |
| PB2503_00542 | YP_003853330.1 | IS 426 transposase | VFG0609 | Protein | 4e-18 | 41 |
| PB2503_00542 | YP_003853330.1 | IS 426 transposase | VFG0622 | Protein | 4e-18 | 41 |
