|
Name : Tthe_0419 (Tthe_0419) Accession : YP_003851072.1 Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571 Genome accession: NC_014410 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 413999 - 414526 bp Length : 528 bp Strand : + Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: tpd:Teth39_0361 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein DNA sequence : ATGTCTGAAACGAACTCAGCTAAATGGTATGTAGTCCATACTTATTCCGGATATGAGAATAAAGTTAAAGCGAATCTGGA AAAGTCTGTTGAAAATAGAAACCTTCAAAACTTAATACATCAGATTGTAGTTCCGACAGAAAAAGTGGTAGAAATTAAAG ACGGCAAAAAGAAGTCTGTTGATAGAAAGGTATTTCCAGGATATGTACTTGTGAAGATGGTCATGAATGACGAATCATGG TATGTTGTTAGGAATACCAGAGGTGTAACTGGCTTTGTTGGGCCTGGGTCCAAACCGGTACCACTTACTGAAGCGGAAGT CAGAAGTTTAGGCATTAAAGAAGCGCAGACGTCAGTAGATATAAAAGTAGGCGATAGTGTTAGAGTTATTGCCGGACCAC TTGAAAATTTCATCGGTGTTGTTGAAGAGATTTACCTTGACAGACAAAAGGCTAAAGTTTTGATTTCGATGTTTGGGAGA GAGACTCCAGTCGAATTTGACTTTGTCCAGATTCAAAAAATTCAATAA Protein sequence : MSETNSAKWYVVHTYSGYENKVKANLEKSVENRNLQNLIHQIVVPTEKVVEIKDGKKKSVDRKVFPGYVLVKMVMNDESW YVVRNTRGVTGFVGPGSKPVPLTEAEVRSLGIKEAQTSVDIKVGDSVRVIAGPLENFIGVVEEIYLDRQKAKVLISMFGR ETPVEFDFVQIQKIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 1e-33 | 48 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-29 | 44 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 2e-31 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 2e-31 | 41 |
