Gene Information

Name : Tthe_2315 (Tthe_2315)
Accession : YP_003852873.1
Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571
Genome accession: NC_014410
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2309082 - 2309744 bp
Length : 663 bp
Strand : -
Note : KEGG: cdl:CDR20291_0341 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGGTTATATTAAAAACGATAAATCTAAGCAAAGTTTACGGGAAGGACGAAAATAAAGTACACGCACTAAAGGATATAAA
CATAAATGTAGAAAAAGGTGAATTTTTGGCAATCGTAGGACCAAGCGGAAGTGGAAAATCAACATTGCTCCACTTATTAG
GAGGACTTGATAAACCAACAGAAGGAACAGTTGAGATAGATGGTGTGGATATATATAAGCTATCTGAGGACAAATTAGCT
ATATACAGGAGGAGAAATATAGGATTCGTATTTCAGCAGTACAATTTGATACCAGTATTAAATGTAAGAGAAAATATAGA
AATGCCAGTAAGACTAGATAAAAAAATACCAGATAAAGAATATATAGATGATTTGATAGAATTTTTAGGGTTAACAGAAA
GACAAAGACATTTACCAAATCAGCTTTCAGGAGGGCAGCAGCAGAGAGTGGCAATAGGCAGAGCATTGGCAGCAAAGCCC
AGTATAATATTAGCAGATGAACCCACGGGGAATTTAGACACAAAAACGACAGGTGAAGTAATGAACCTGATAAAAAGTTC
TATTAAAAAATATAATCAGACACTTGTATTGATAACACATAATGAAAATATAGCACAAAGTGCAGACAGAATATTATCTA
TCGTTGATGGAGAAATACGATAG

Protein sequence : 
MVILKTINLSKVYGKDENKVHALKDININVEKGEFLAIVGPSGSGKSTLLHLLGGLDKPTEGTVEIDGVDIYKLSEDKLA
IYRRRNIGFVFQQYNLIPVLNVRENIEMPVRLDKKIPDKEYIDDLIEFLGLTERQRHLPNQLSGGQQQRVAIGRALAAKP
SIILADEPTGNLDTKTTGEVMNLIKSSIKKYNQTLVLITHNENIAQSADRILSIVDGEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-41 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tthe_2315 YP_003852873.1 ABC transporter CP001581.1.gene798.p Protein 2e-63 61
Tthe_2315 YP_003852873.1 ABC transporter CP001581.1.gene598.p Protein 2e-60 56
Tthe_2315 YP_003852873.1 ABC transporter NC_012469.1.7686878. Protein 2e-39 46
Tthe_2315 YP_003852873.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 44
Tthe_2315 YP_003852873.1 ABC transporter NC_012469.1.7685735. Protein 1e-36 41