Gene Information

Name : Tthe_1738 (Tthe_1738)
Accession : YP_003852319.1
Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571
Genome accession: NC_014410
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1731985 - 1733037 bp
Length : 1053 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: tex:Teth514_2303 integrase catalytic subunit

DNA sequence :
ATGGCTGAGAATAATAATACCACAAAAAAGAGAAGTTTTAAACACCTGTCACAATATGAAAGGGGAATGATTTATACATC
AAGAGAACAAGGTAAATCAATGCATCAAATAGCAAAGATACTGAGAAGGGCTCCAAGTACTGTTTCAAGAGAGATAAGAA
GAGGAACTGTAACCCAAATGAGATCAGATTTAACTACATATGAGAAGTATTTTCCTGAAGTGGGCTACGAGATATATAAA
AAGAATCGAAAAAACTGCGGAGCAAAGCTAAGAGTTGTAAAAGCAGAGAAATTCTTGAGATTCGCAGATGGAAAAATATT
GGAAGAGAAATGGTCACCCGATGCAGTTGTAGGTTACTGCAGAAATAATGTCTACTGGAAAGAAGAAATGGTATGCACCA
AAACCCTTTATAATTACATAGATAAAGGCTTGTTGAGAGTTCGCAATATTGATTTGTGCTTAAAAGTGCGCTTAAAACCA
AAGAAAAAGATAATAAGAAAGAACAAGAAGATTATGGGAGAGAGCATATCGCAAAGACCTGAGGAGATAAACAAAAGAGA
GAGTTTTGGGCATTGGGAAATAGATACTGTTATAGGCAAGAGATCAAATGATAAAGCATTATTAACACTGACAGAACGTT
TAACAAGATATGAATATATCTTTGTGATAGATGAAAAAGACAGCTCATCAATCAAGAAGGTATTTGATGAACTCAAAGTG
GAATATAAGGAGAATTTTTCAAAGATATTTAAGAGCATAACAGCAGACAATGGCTCGGAATTTGCCGAATTGAGTGAGAT
ATTAAAGAAATGTGAAAGCAAGGCATATTTTAGTCACCCATATTCTGCATTTGAGAGAGGGACAAACGAGCGTCATAATG
GGTTAATAAGGAGGTTTATACCTAAAGGCAAAACGATAGCTGACTTGTCAGAGTGGGCTATAAGACGAGTGCAAAATTGG
TGCAATCAACTTCCAAGGAGGATCTTAAGATACAAGACACCTGAAGAATGTTTTTTAAATGAGGTTAGCAAAGTTATCAA
TTATGCGCAATGA

Protein sequence :
MAENNNTTKKRSFKHLSQYERGMIYTSREQGKSMHQIAKILRRAPSTVSREIRRGTVTQMRSDLTTYEKYFPEVGYEIYK
KNRKNCGAKLRVVKAEKFLRFADGKILEEKWSPDAVVGYCRNNVYWKEEMVCTKTLYNYIDKGLLRVRNIDLCLKVRLKP
KKKIIRKNKKIMGESISQRPEEINKRESFGHWEIDTVIGKRSNDKALLTLTERLTRYEYIFVIDEKDSSSIKKVFDELKV
EYKENFSKIFKSITADNGSEFAELSEILKKCESKAYFSHPYSAFERGTNERHNGLIRRFIPKGKTIADLSEWAIRRVQNW
CNQLPRRILRYKTPEECFLNEVSKVINYAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 2e-57 48
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 8e-57 48
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 5e-57 48
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 5e-57 48
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 5e-57 48
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 4e-57 48
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 2e-57 48
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 2e-56 48
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 1e-56 47
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 3e-33 44