Gene Information

Name : Tthe_1452 (Tthe_1452)
Accession : YP_003852050.1
Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571
Genome accession: NC_014410
Putative virulence/resistance : Virulence
Product : ATPase, FliI/YscN family
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1454197 - 1455513 bp
Length : 1317 bp
Strand : -
Note : TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: tte:TTE1439 flagellar biosynthesis

DNA sequence :
ATGATCAGTAGTAATTTTTTTGAAAGATATAAGACTGTTTTACGGGACAAAAGCTTTATAAAGTATTATGGAAAAGTAAG
TCAAGTTGTTGGTTTGACAATTGAAAGCATTGGTCCAATATCAAATGTCGGAGATGTTTGTGAGATAAAGTCTATAAACG
GAAATACAATTTATGCTGAAGTGATGGGATTTAAAGATGATAAAGTTTATTTGATGCCTTTAGGAGATATGGATGGCATA
GGGCCTGGAAATAGTGTTATATCTACAGGGCAAAAATTAAAGATAGGAGTTGGAGAAGAGTTACTTGGAAGGGTTATAGA
TGCATTAGGCAATCCAATTGATGGGAAGGGACCCATAAAATTTAAGAAGCTAGTAAGCACTAATAATGTTCCGCCGAATC
CCATTGAGAGAAAGAGAATAAGGGAAGCGATGCCTCTTGGCATAAAAGCGATAGATGGTTTGCTTACATGTGGTAAAGGA
CAGAGAATAGGTATTTTTGCTGGTAGTGGCGTAGGAAAAAGTACTCTACTTGGAATGATAGCCAGAAATGCCAAATCTGA
TATTAATGTAATTGCTTTAATTGGCGAAAGAGGAAGAGAAGTAAATGAGTTTATTGAGAAAGACTTGGGTGAGGACGGTT
TAAAAAGATCGATTTTAGTCGTATCGACTTCTGATACACCAGCATTGATGAGAGTTAAAGGTGCAATGACTGCTACATCT
ATTGCAGAATATTTCAGAGATCAAGGGCTTGATGTTTTATTTATGATGGATTCTGTTACAAGATTTGCTATGGCACAAAG
AGAAATAGGGTTGTCTATTGGTGAAGCTCCAGTTTCAAGAGGTTATACACCTTCAGTTTTTTCGGTTCTTCCTAAGTTAT
TAGAGAGAGCGGGTTCTGCAAAAAATGGCTCTATAACAGCTCTGTATACAGTTTTGGTAGACGGTGATGATTTAAATGAA
CCGATAACAGATGCTGTCAGAGGCATATTAGATGGACATATAGTTTTGTCAAGAAAGCTTGCAAATAAAGGGCAATATCC
TGCAATAGATATTTTAGCAAGTATTAGCAGAGTTATGAATGATATTGTATCAGATGAACACAAAAATTTATCTTCGAAAT
TTAAAAGTATATTATCAGTTTATGAGGAGTCAGAAGATTTAATTAATATAGGTGCTTATGCAAAAGGGAGTAATCCCAAA
ATAGATGAAGCAATTTTATTACACGACGATATGATAAATTATATAAAACAGACTACAGACGAAAATTATAACTTTGAAGA
TGAACTAAATATGCTAAAAAATATTTTAAATAGGTGA

Protein sequence :
MISSNFFERYKTVLRDKSFIKYYGKVSQVVGLTIESIGPISNVGDVCEIKSINGNTIYAEVMGFKDDKVYLMPLGDMDGI
GPGNSVISTGQKLKIGVGEELLGRVIDALGNPIDGKGPIKFKKLVSTNNVPPNPIERKRIREAMPLGIKAIDGLLTCGKG
QRIGIFAGSGVGKSTLLGMIARNAKSDINVIALIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMTATS
IAEYFRDQGLDVLFMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSAKNGSITALYTVLVDGDDLNE
PITDAVRGILDGHIVLSRKLANKGQYPAIDILASISRVMNDIVSDEHKNLSSKFKSILSVYEESEDLINIGAYAKGSNPK
IDEAILLHDDMINYIKQTTDENYNFEDELNMLKNILNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-107 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-104 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-104 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-104 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-102 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-103 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-103 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-103 50
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-92 50
escN AAC38383.1 EscN Virulence LEE Protein 1e-90 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-101 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-101 49
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-91 49
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-91 49
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-91 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-91 49
escN AAK26715.1 EscN Virulence LEE Protein 4e-91 49
escN AAL57542.1 EscN Virulence LEE Protein 4e-91 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-90 49
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-90 49
escN AAC31513.1 L0034 Virulence LEE Protein 1e-90 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-91 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-90 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-88 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-88 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-89 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-89 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-88 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-88 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-89 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-79 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-82 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-82 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 8e-79 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-92 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 8e-81 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-88 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 8e-90 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 8e-83 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-83 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 7e-84 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 5e-77 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 5e-77 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 5e-77 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0390 Protein 5e-106 53
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG2144 Protein 8e-107 52
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0192 Protein 3e-108 51
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG1254 Protein 2e-102 51
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0048 Protein 6e-107 50
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0730 Protein 6e-91 50
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0812 Protein 7e-91 49
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG2499 Protein 1e-94 47
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG0515 Protein 1e-89 46
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG2331 Protein 4e-91 44
Tthe_1452 YP_003852050.1 ATPase, FliI/YscN family VFG1778 Protein 3e-73 42