Gene Information

Name : Tthe_1439 (Tthe_1439)
Accession : YP_003852037.1
Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571
Genome accession: NC_014410
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1445518 - 1445787 bp
Length : 270 bp
Strand : -
Note : KEGG: tex:Teth514_1676 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3

DNA sequence :
ATGGATCCTGGAGTAGTTCTTGATATTGGAAGGGAAGCATTAATGGTAACAATGATTGTATCAGCGCCGCTTTTAATTGT
ATCTCTATTGATAGGACTCATTATAAGTATATTTCAAGCGACAACACAGATTCAGGAGCAGACTTTGACATTTGTACCGA
AGATTTTAGCTATTTTTGCTTCTATAATATTGTTTGGGCCATGGATGCTAACAATATTAATTAATTATACACAAAAATTA
ATATTGAACATTAATAATTTTATTAAGTAG

Protein sequence :
MDPGVVLDIGREALMVTMIVSAPLLIVSLLIGLIISIFQATTQIQEQTLTFVPKILAIFASIILFGPWMLTILINYTQKL
ILNINNFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-04 42
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-04 42
escS AAC38370.1 EscS Virulence LEE Protein 0.001 42
escS AAC31527.1 L0048 Virulence LEE Protein 0.001 42
escS ACU09472.1 hypothetical protein Not tested LEE Protein 0.001 42
unnamed AAL06355.1 EscS Virulence LEE Protein 6e-04 42
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 0.002 42
escS NP_290282.1 hypothetical protein Virulence LEE Protein 0.002 42
ECs4582 NP_312609.1 EscS Virulence LEE Protein 0.002 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 8e-04 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 6e-04 41
escS CAI43888.1 EscS protein Virulence LEE Protein 6e-04 41
escS AAK26701.1 EscS Virulence LEE Protein 6e-04 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 8e-04 41
escS AAL57528.1 EscS Virulence LEE Protein 6e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG1260 Protein 4e-11 49
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG2339 Protein 2e-10 45
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG2495 Protein 2e-09 42
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG0826 Protein 6e-04 42
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG0716 Protein 6e-04 42