|
Name : copB (MTBMA_c11490) Accession : YP_003850055.1 Strain : Methanothermobacter marburgensis Marburg Genome accession: NC_014408 Putative virulence/resistance : Resistance Product : copper-transporting P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.4 Position : 1063356 - 1065293 bp Length : 1938 bp Strand : + Note : - DNA sequence : ATGCACAGACACCATGAAATGGAATACAGGAGGCGGTTCATTGTATGCCTCCTACTTACCATCCCTGTTATCCTGCTTGG TGAACTGCCAACAGGGACTGTTCTGGTAAGCTTTGAGGGTAGTGAATTCGTTGTTCTGATTATATCCTCCATCATCTTCT TCTATGGGGGCTACCCCTTCCTGAGGGGATCCCTGAGGGAGATCTCATCCCGAACCCCCGGTATGATGACCCTCATCGCA GTGGCCATAACCATGGCGTACATCTACAGCCTGGGGGTACTGGCGGGCCTTGAGGGTATGGTATTCTTCGTTGAACTTGT AACCCTTATTGACGTCATGCTACTGGGGCACTGGATCGAGATGAGATCCGTCCGGAGCGCCTCAGGGGCCATTGAGAGGC TTGCAAGGCTCATCCCCAAGAAGGCCCACCTCCTGGTCGACGGGAAGGTTGAGGATGTTGATGTGGCCGACCTCAAACCA GGTGACATTGTGCTTGTGAGGTCAGCGGAGAAGATACCCACTGATGGAACCGTGATAAAGGGGGAGTCCCATGTAAATGA GGCGCTGCTCACAGGGGAGTCCGTTCCCATCAGAAAATCCCCTGGTGACCTGGTTATTGGGGGTTCCATCAACACCGGAG GCTCCCTAACCGTGGAGGTGGAGCGTGTTGGTGAGGAATCATTCATTTCCCAGATAATCCAGCTTGTGGGAACGGCCCAG GAGGGAAGGACAAGAACGCAGGTGCTGGCAGACAGGGCGGCATTCTGGTTAACCCTTGTCGCCCTTACAGGGGGGGCTAT CACATTCACAGCGTGGTACGCAATTGGTATGGGAGCCTTCTTCTCACTTGAAAGGTCAGTGACGGTCATGGTCACCGCCT GCCCCCATGCCCTGGGACTTGCAATACCCCTTGTGATAGCGGTCTCCACCGCAATCTCAGCAGGAAGGGGGATACTCATA AGGAACCGGAAAGCCTTCGAAAACGCCATGAACCCTGATGTTGTTGTCTTTGACAAGACAGGGACACTGACTGTTGGTGA GCTGGGAATAACCGATGTCATATCCTTTGACCCTGAAATGGATGAAGGGGAAATACTATCCTATGCTGCAGCCGTTGAGT CAGCCTCCAGTCACCCCATAGCCAGGGGCATAGTTGAGGCCGTGGATGAGGTGCTCCCTGTGGAGAACTTTGCGGCGATA GGTGGAAGGGGCGTCATGGGGCATGTGAACGGATCAAGGGTGAAGGTACTCAGCTACAGTTACACAGAGGAACTCGGACT CATGGTTAAGGACCCCCGGGTTGATGAACTCATGGAGCAGCCAAAAACCACGGTCTTTGTAACCGTGAATGATGAACTGA AGGGCTGCATTGCCCTTGCAGATGTCATACGCCCAGAGGCAAGGGAGGCCACTAGGATTCTCAAATCAAGGGGTGTAAGG TGCCTGATGTTAACCGGTGACAGCCAGAGGGTCGCCGAGTGGGTTGCCTCAGAACTTGGCATTGAAGAATACCAGGCAGA ACTCATCCCCCAGGAGAAATATGAGGTCATAAGGGGGCTGCAGGACGATGGACTCAGGGTTGCCGTGGTGGGGGATGGTG TCAACGACGCCCCGGCCCTTGCACAGGCAGATATAGGAATAGCCATAGGGGCCGGGACCGACGTGGCGATCGAAAGTGCG GATGTGGTGCTTGTGAGGAGCAACCCCCTGGATGTTGTTGACCTCATGGACCTTGCATCGGCCACCTACAGCAAGATGAA GGAGAACCTGATCTGGGCCACAGGTTACAACGTCATAGCCCTCCCCCTTGCTGCTGGGGTGCTGTATGGTCAGGGCCTTA TCCTGACGCCAGCCATGGGGGCCATACTCATGTCTGTAAGTACTGTCATAGTGGCCCTCAACGCCAAGACATTCAGCTTC AGGGGTCAGAGCGGTTAG Protein sequence : MHRHHEMEYRRRFIVCLLLTIPVILLGELPTGTVLVSFEGSEFVVLIISSIIFFYGGYPFLRGSLREISSRTPGMMTLIA VAITMAYIYSLGVLAGLEGMVFFVELVTLIDVMLLGHWIEMRSVRSASGAIERLARLIPKKAHLLVDGKVEDVDVADLKP GDIVLVRSAEKIPTDGTVIKGESHVNEALLTGESVPIRKSPGDLVIGGSINTGGSLTVEVERVGEESFISQIIQLVGTAQ EGRTRTQVLADRAAFWLTLVALTGGAITFTAWYAIGMGAFFSLERSVTVMVTACPHALGLAIPLVIAVSTAISAGRGILI RNRKAFENAMNPDVVVFDKTGTLTVGELGITDVISFDPEMDEGEILSYAAAVESASSHPIARGIVEAVDEVLPVENFAAI GGRGVMGHVNGSRVKVLSYSYTEELGLMVKDPRVDELMEQPKTTVFVTVNDELKGCIALADVIRPEAREATRILKSRGVR CLMLTGDSQRVAEWVASELGIEEYQAELIPQEKYEVIRGLQDDGLRVAVVGDGVNDAPALAQADIGIAIGAGTDVAIESA DVVLVRSNPLDVVDLMDLASATYSKMKENLIWATGYNVIALPLAAGVLYGQGLILTPAMGAILMSVSTVIVALNAKTFSF RGQSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-81 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_003850055.1 | copper-transporting P-type ATPase | BAC0629 | Protein | 6e-151 | 57 |
| copB | YP_003850055.1 | copper-transporting P-type ATPase | BAC0079 | Protein | 1e-112 | 46 |
| copB | YP_003850055.1 | copper-transporting P-type ATPase | BAC0383 | Protein | 6e-105 | 44 |
| copB | YP_003850055.1 | copper-transporting P-type ATPase | BAC0101 | Protein | 2e-72 | 41 |
