Gene Information

Name : Galf_0867 (Galf_0867)
Accession : YP_003846663.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Resistance
Product : cadmium-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 914726 - 916897 bp
Length : 2172 bp
Strand : +
Note : KEGG: mms:mma_1796 cation-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloa

DNA sequence :
ATGAAACACTCAATGTTCAATATTCGTAACATGGACTGTCCAACTGAGGAGGCGTTGATCCGCAAGCGTCTCGGGGCTGT
GACGGGCATAAGCGAACTCACCTTCAATCTCATGGATCGTCGCCTTGGCGTTGAACACACGCTGGCCGATGAGCAACCTA
TCCTTGATGCCTTGCGTGAAATAGGCATGAATGCGGTTCCTGTAACGGAGGCGGATACCGTTTCAAAATCTGAAGCCGTT
ACGCACGTCGTATCTCGCCGGACTTGGATTTTCATGACAGTGTCCGGTATTACCGCCATCACCTCGGAAATCATCGTATG
GAGCGGTGCTGACGAGCAGTCATTGGCTGTGATCGCTCTGGCCTTGTTGTCCATTGTGACCGGCGGTCTTGGCACCCTGA
AAAAAGGCTGGATCGCGCTCAAAAATTTCACGCTCAACATGAACTTCCTGATGAGCATCGCCACGATAGGCGCAATTTCC
ATCGGGCAGTGGCCGGAAGCGGCGGTGGTAATCTTTTTGTTTGCGTTGTCCGAGTTGATCGAAACATTTTCACTGGAACG
TGCCAAGCATGCGATTCGCGGTCTCATGGCGATGACGCCCGAAACGGCCACGGTACGCATCGACGGTGGCGAATGGGTCG
AGAAAGGGGCGGCTGATGTGCAGGTAGAGCAAATCGTCCGAGTCAGGCCGGGTGAGCGTATTCCGCTGGACGGTGTGGTC
ACGGCGGGCGGCAGTTCGGTGAATCAGGCACCGATTACCGGGGAAAGTATTCCTGTGGCGAAGACTGCGGGCGACCCGGT
TTTCGCTGGTACGCTGAACGAGCGCGGGGTGCTGGAATTCCGCGTGACGGCAACCAAGGGGCACACCACGCTTGACCGCA
TTATCCGCTCGGTTCAGGAGGCGCAGGGTCAGCGCGCGCCGACACAACGCTTCGTTGACCAATTTGCGCGTTACTACACA
CCTGCTGTTGTGGCTTTTGCGGTTCTGGTGGCAGTCGTGCCGCCGCTGTTGTTCGGCGCGGCGTTCGAACTCTGGTTTTA
CAAGGCGCTGGTCATGCTGGTGATCGCCTGCCCGTGCGCGCTGGTAATCTCCACACCGGTCACTGTGGTGAGCGGTTTGG
CCTCAGCCGCAAGGCAGGGCATTCTGGTTAAGGGCGGCCTGCATCTGGAGAATGGCCGACTGATCAAAATCGTGGCACTG
GACAAGACCGGCACGCTCACCCACGGCAGGCCTGTTGTGACCGATGTGATTCCGCTCGTTGATCAAGCTGTGGACGTTTT
GCTCCAACTCGCTGCTAGTGTGGATGCACATTCCGGGCATCCAGTCGCGGCCGCCATCGTGTCGGCCTGGCAGACATCTG
CCGATGGGAGTGCGCGTTTGCTGTTACCGGTTGCTTCATTCGAGTCCCTCACTGGTCGCGGCGCGAAAGCGGTAATTGAA
GACCAACTCTATTATGTCGGCAACCATCGCCAAGTAGAGGAACTGGGTATTTGCGGGCCGCATGTCGAAGAAGTGCTAAG
GCGATTGGAAGAGGAAGGCAAGACAGCCGTGGTGTTGACCACCGAAAATGCGCCACTGTGCATCATCGGCGTTGCCGATA
CGTTGCGCGGTCATAGTGTCGAGGCCATCAAACAGCTTCATGCACTCGGCGTGGCTTCGGTGATGCTGACTGGCGACAAT
CAAACGACTGCCAATGTGATCGCTGCTGAAGTGGGTATTGACGATGCGCGTGGAAATCTGCTGCCAGAGGACAAATTGGC
GGTTATTGATGATTTGATTGCCCGATATGGCAAGGTTGGCATGGTGGGGGACGGTATCAATGATGCGCCGGCGCTGGCCA
GGGCATCCATCGGTTTTGCCATGGGTAGCGCCGGAACCGATACCGCCATTGAGACCGCCGACGTAGCCTTGATGGATGAT
GATTTGCGCAAACTGGCCCGGTTTATCGCGCTGAGCCGTTATACTTCCCGTGTCTTACGGCAGAACATCACGCTGGCCAT
CGGCATCAAGGTCGTGTTCTTTGCCTTGGCACTCGCGGGGAAAGCCACGCTCTGGATGGCGGTTTTTGCAGATATGGGTG
CCAGCCTGATTGTGATATTTAATGGCATGCGCTTGCTCCGTATTAAGGGCGGTATTGAACGCGACCACATAAAATCTGGC
CATACGAGATGA

Protein sequence :
MKHSMFNIRNMDCPTEEALIRKRLGAVTGISELTFNLMDRRLGVEHTLADEQPILDALREIGMNAVPVTEADTVSKSEAV
THVVSRRTWIFMTVSGITAITSEIIVWSGADEQSLAVIALALLSIVTGGLGTLKKGWIALKNFTLNMNFLMSIATIGAIS
IGQWPEAAVVIFLFALSELIETFSLERAKHAIRGLMAMTPETATVRIDGGEWVEKGAADVQVEQIVRVRPGERIPLDGVV
TAGGSSVNQAPITGESIPVAKTAGDPVFAGTLNERGVLEFRVTATKGHTTLDRIIRSVQEAQGQRAPTQRFVDQFARYYT
PAVVAFAVLVAVVPPLLFGAAFELWFYKALVMLVIACPCALVISTPVTVVSGLASAARQGILVKGGLHLENGRLIKIVAL
DKTGTLTHGRPVVTDVIPLVDQAVDVLLQLAASVDAHSGHPVAAAIVSAWQTSADGSARLLLPVASFESLTGRGAKAVIE
DQLYYVGNHRQVEELGICGPHVEEVLRRLEEEGKTAVVLTTENAPLCIIGVADTLRGHSVEAIKQLHALGVASVMLTGDN
QTTANVIAAEVGIDDARGNLLPEDKLAVIDDLIARYGKVGMVGDGINDAPALARASIGFAMGSAGTDTAIETADVALMDD
DLRKLARFIALSRYTSRVLRQNITLAIGIKVVFFALALAGKATLWMAVFADMGASLIVIFNGMRLLRIKGGIERDHIKSG
HTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 7e-165 57
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 4e-114 48
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 4e-114 48
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-114 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_0867 YP_003846663.1 cadmium-translocating P-type ATPase BAC0298 Protein 1e-164 56
Galf_0867 YP_003846663.1 cadmium-translocating P-type ATPase BAC0461 Protein 3e-78 44
Galf_0867 YP_003846663.1 cadmium-translocating P-type ATPase BAC0455 Protein 2e-89 41
Galf_0867 YP_003846663.1 cadmium-translocating P-type ATPase BAC0124 Protein 6e-73 41