Gene Information

Name : Galf_0638 (Galf_0638)
Accession : YP_003846443.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 677150 - 679684 bp
Length : 2535 bp
Strand : -
Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: nmu:Nmul_A0670 DNA mismatch repair protein MutS; SMART: DNA mismatch repair pr

DNA sequence :
ATGGAAAACAACAAAGCCAATCACACGCCGATGATGCAGCAGTTTTTGCGCATCAAGGCCGAACACCCGGACGGACTCCT
GTTTTACCGGATGGGCGATTTTTATGAGATGTTTTTCGAAGATGCCGAGCGCGCCGCAAAGCTGCTCGATATCACGCTGA
CGCATCGCGGCTCCTCAAACGGCGTGCCGATCAAGATGTGCGGCATTCCCTATCACGCAGCCGAACAATATCTGGCGCGA
CTGGTCAAGCTGGGGCTGTCGGTCGCGATATGCGAGCAGGTGGGGGATCCTGCCACCAGCAAGGGACCTGTCGAGCGCAA
AGTCATGCGCATCGTCACCCCTGGCACCCTGACCGATTCGGCGCTGCTCGACGAAAAACGCGACAACCTGCTGCTAAGCC
TGCACCAGCGGAACGGCCTGTTGGGAATGGCCTGGATGAATTTGGCCTCGGGACACTTTTATGTCTGCGAGACGGCGATT
GACAATCTGCCCGCCGAACTCGAACGCCTGCAACCTTCGGAAATCCTGCAAGCCGAGAATTCAAATCTGCTCCCTGCCGC
ATCTTGCCGGCAGTTGCCCTCGTGGCATTTCGAACTCGACACCGCACGCCGCACGCTGTGTCAGCAATTTGCCACGCTGG
ATCTGGCAGGATTCGGCTGCGATGAGTACACCGCAGGCCTTGAAGCTGCCGGCGCCCTGTTGGGGTATATCCGTCTTACC
CAAGGCCAGACGATGGATCACGTCAGTAGCTTGCGAGTCTACAGCGCCGATCACTACGTGCGCATGGATGCCGCGACAAG
GCGCAATCTGGAAATCACCCAGACCTTGCGGGGCGAGGCAGCGCCCACACTGCTCTCCTTGCTCGACACGTGTTCGACCA
ACATGGGCAGCCGGCTACTGTCGCACTGGCTGCACCATCCGCTGCGCGACCGCGATATTTTGCGCGCGCGCCTCGATGCG
GTCGATAAACTGACCGAGCTGTCGGATGCTGTACAGACGCACTTAAAGCCCTGTGTCGATGTCGAGCGCATCACCGCACG
CATCGCTTTGAAATCGGCCCGCCCGCGCGATCTGTCCGGCCTGCGTGATACACTCACCGCGCTACCGCAACTGCACACAA
CGTTAAACGCCTGCGATTCAACGCGGGTTAATGCGCTAAGCGATGCCCTGCAAGCGGATGTCCATCTCACGGCGCTACTA
CAAGCTTCGTTGCGCAGCGACCCGTCCTCTGTGATACGCGAAGGCGGTGTGATTGCCGACGGATTCGATGCAGAACTCGA
CGAATTGCGCGGCATACAGACCAATTGCGGCGACTTTTTGCTGGCACTGGAAGCGCGCGAAAAAGCGCGCACCGGCATTT
CTACTTTAAAAGTGGAATACAACCGCGTGCATGGTTTCTACATCGAGGTGTCCGTCGCGCAAAGCGTCAACGTGCCAGAT
GACTATCGCCGCCGCCAGACGCTCAAGAACGCAGAACGCTACATCACGCCAGAACTGAAAACCTTCGAGGACAAGGCCCT
GTCCGCCAACGACCGCGCCCTAACCCGCGAAAAGTTTCTCTATGATCAGCTACTGGAACAATTAGCGCCGTACATTGCGC
AACTGCAACGCATCTCAGGCGCGATCTCCGAACTGGATGTCTTGGCCACCTTTGCCGAGCGTGCCCGCACGCTGCACTTT
ACCGCACCGCAATTTACCGGCGATTCCACAATTCAAATCAGCGGCGGACGCCACCCGGTCGTGGAAGCGCAAGTTGAGCG
CTTCACGCCCAACGATACCGAGTTGTCTGACGCGCGGCGCATGCTGCTCATCACAGGCCCGAACATGGGGGGTAAATCCA
CCTATATGCGTCAGGTCGCCATCATCGCACTACTGGCCCATGTCGGCAGTTTTGTGCCGGCGCAGCAAGCGGTCTTAGGC
GAGATCGACCAGATTTTCACCCGCATCGGCTCATCGGACGATCTGGCCAGCGGACGCTCCACCTTCATGGTCGAAATGAC
GGAGGCGGCCAACATCCTGCACAACGCCACCGCACAGAGTCTGGTGCTGGTGGACGAAATCGGGCGCGGCACCTCAACCT
TCGATGGACTCGCTCTGGCCTACGCGATTGCCTGCCATCTGCTGAACAAGAACCAGAGCTACACCTTGTTCGCCACGCAT
TATTTCGAACTGACGCGTTTATCAGAAGAATTCGCCCAGCTTGCCAACGTACATCTGAGTGCCATTGAGCACCAGCACAG
CATCGTCTTTTTGCACTCGGTCAATGAAGGTGCGGCGAGCCAAAGTTACGGCCTGCAGGTTGCGGCACTGGCAGGCGTGC
CGGCGCAAGTCATCAAAACCGCCAAAAAGCAGCTGCGCGTACTGGAACAAAACAGCGCCGCACAAAGTCCGCAGGGTGAT
TTATTCGCGGCAATACCCGACCTCCCTGAACCCGAAGAGCATGCGCTACTGGCAGCTTTACGCGACATCCAGCCCGATGA
CATGAGCCCGAAAGCAGCGCTGGAAACACTGTACCAGTTAAAAAAACTGCTTTAA

Protein sequence :
MENNKANHTPMMQQFLRIKAEHPDGLLFYRMGDFYEMFFEDAERAAKLLDITLTHRGSSNGVPIKMCGIPYHAAEQYLAR
LVKLGLSVAICEQVGDPATSKGPVERKVMRIVTPGTLTDSALLDEKRDNLLLSLHQRNGLLGMAWMNLASGHFYVCETAI
DNLPAELERLQPSEILQAENSNLLPAASCRQLPSWHFELDTARRTLCQQFATLDLAGFGCDEYTAGLEAAGALLGYIRLT
QGQTMDHVSSLRVYSADHYVRMDAATRRNLEITQTLRGEAAPTLLSLLDTCSTNMGSRLLSHWLHHPLRDRDILRARLDA
VDKLTELSDAVQTHLKPCVDVERITARIALKSARPRDLSGLRDTLTALPQLHTTLNACDSTRVNALSDALQADVHLTALL
QASLRSDPSSVIREGGVIADGFDAELDELRGIQTNCGDFLLALEAREKARTGISTLKVEYNRVHGFYIEVSVAQSVNVPD
DYRRRQTLKNAERYITPELKTFEDKALSANDRALTREKFLYDQLLEQLAPYIAQLQRISGAISELDVLATFAERARTLHF
TAPQFTGDSTIQISGGRHPVVEAQVERFTPNDTELSDARRMLLITGPNMGGKSTYMRQVAIIALLAHVGSFVPAQQAVLG
EIDQIFTRIGSSDDLASGRSTFMVEMTEAANILHNATAQSLVLVDEIGRGTSTFDGLALAYAIACHLLNKNQSYTLFATH
YFELTRLSEEFAQLANVHLSAIEHQHSIVFLHSVNEGAASQSYGLQVAALAGVPAQVIKTAKKQLRVLEQNSAAQSPQGD
LFAAIPDLPEPEEHALLAALRDIQPDDMSPKAALETLYQLKKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_0638 YP_003846443.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55