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Name : Galf_0413 (Galf_0413) Accession : YP_003846221.1 Strain : Gallionella capsiferriformans ES-2 Genome accession: NC_014394 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 463395 - 465641 bp Length : 2247 bp Strand : + Note : KEGG: slt:Slit_2541 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : ATGAAATTTCGTTTTCCCATAATTATCATCGATGAAGATTTTCGTTCCGAAAATGCCAGCGGATTAGGCATACGTGCGCT GGCCGATGCGCTGGTCAAAGAGGGTATGGAAGTACTGGGTGTAACCAGTTACGGTGACCTGACCTCTTTCGCGCAGCAGC AAAGCCGGGCGTCGGCATTTTTGCTGTCCATCGATGACGAGGAGTTTGGCGGCGGCAGTGCTGAAGAAACGGAAGTTGCG CTCAAGAGTCTGCGCGCCTTTGTCGAAGAGATCCGTTTCAAGAACGAAGATATTCCGATCTATCTGTATGGTGAGACGCG GACCTCGCGCCACATTCCGAATGATGTGTTGCGCGAGCTGCACGGCTTTATTCACATGCATGAGGATACGCCGGAGTTCG TGGCGCGCCACATTATCCGTGAAGCGCGCTCCTATCTGGATTCTTTGGCGCCGCCGTTTTTCCGTGCCTTGCTCCATTAC GCGCAGGACGGTTCCTATTCGTGGCATTGCCCCGGGCACTCGGGTGGCGTGGCTTTTCTGAAGTCACCTGTGGGCCAGAT GTTCCATCAGTTTTTTGGCGAGAACATGTTGCGCGCTGACGTGTGCAATGCGGTGGATGAACTGGGTCAGTTGCTCGATC ACACAGGGCCGGTTGCCGCGTCAGAACGCAATGCCGCGCGTATCTTTAACTCGGATCACCTGTTCTTTGTCACCAATGGT ACCTCGACGTCGAACAAAATCGTCTGGCACTCGACGGTCGCACCCGACGATATCGTCGTCGTGGATCGCAACTGCCACAA GTCCATTCTGCATTCAATCATGATGACGGGCGCTGTGCCGGTATTTTTGACGCCGACCCGCAATCATTACGGCATCATCG GGCCGATACCAAAGTCCGAGTTCGAGCCTGAGAGCATCCAGCGTAAGATCGACGCGAATCCGTTTATCAAAGACAAGACC AAGAAGCCGCGCATTCTGACTATCACGCAGAGTACCTACGACGGCATCGTCTATAACGTCGAAATGTTGAAAGAAATGCT GGACGGTCGCATCGACACGCTGCATTTCGATGAGGCGTGGCTGCCGCACGCGGCGTTCCACGATTTTTATAAGGACATGC ACGCGATTGGAAAAGATCGTCCTCAGGCGCGGGAATCGATGATTTTCGCGACGCAGTCCACGCATAAATTGCTCGCAGGC CTCTCTCAGGCCTCGCAAATTTTGATACGTGAGCCGCAAAACCGCAAGCTGAACAAATACATTTTCAACGAAGCCTATCT GATGCACACGTCCACCAGTCCACAGTACGCGATTATCGCGTCCTGCGATGTGGCGGCAGCGATGATGGAGGCGCCGGGCG GGCCTGCGCTGGTCGATGAGTCCATTGCCGAAGCGCTGGATTTTCGTCGTGCGATGCGCAAGGTGGACGAGGAATTCGGG CTGGACTGGTGGTTTCAGGTCTGGGGGCCGGATGTGATCGCCGAAGAGGGTGTCGGTTCGCGCGAAGACTGGGTGTTGAA AGCGTCCGACAAGTGGCACGGATTCGGCGATCTGGCCGAAGGCTTCAATATGCTCGATCCGATTAAGGCAACGATCATCA CGCCGGGGTTGGACGTGGATGGTGATTTTTCCGATAACGGGATTCCAGCTTCGATGGTCACCAAGTATCTGGCCGAACAC GGCGTGATCGTCGAAAAATGCGGTCTGTACTCATTCTTCATCATGTTTACCATCGGCATCACTAAGGGACGCTGGAATAC GCTGCTGACCGCGCTCCAGCAGTTCAAGGATGATTACGATAAGAATCAGCCGCTGTGGCGTATTTTGCCCGAGTTTGCCG CTAAATATCCGCGCTACGAGCGCACGGGATTGCGCGATCTTTGCCAGCAGATACACGATGCCTATAAGCTGCATAATGTC GCGCGCATGACGACCGAGATGTATCTGTCCGATATGCAGCCGGCGATGAAGCCGTCCGATGCCTTTGCCAGAATGGCGCA TGAAGAGCTCGATCGTGTGGAAATCGACGATCTGGAAGGTCGCATTACCGCGGTGCTGCTCACGCCTTATCCGCCGGGTA TCCCGTTGCTGATTCCGGGTGAAATGTTTAACAAAACGATTATCGATTATCTGAAGTTCGCACGCGATTTCAGCCAGAAA TTACCCGGTTTCGAGACTGATATACACGGTCTGGTTGCCGAGGAAGTGGATGGCGTGAAGCGCTATTTTGTGGATTGTGT GAGGTAA Protein sequence : MKFRFPIIIIDEDFRSENASGLGIRALADALVKEGMEVLGVTSYGDLTSFAQQQSRASAFLLSIDDEEFGGGSAEETEVA LKSLRAFVEEIRFKNEDIPIYLYGETRTSRHIPNDVLRELHGFIHMHEDTPEFVARHIIREARSYLDSLAPPFFRALLHY AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNSDHLFFVTNG TSTSNKIVWHSTVAPDDIVVVDRNCHKSILHSIMMTGAVPVFLTPTRNHYGIIGPIPKSEFEPESIQRKIDANPFIKDKT KKPRILTITQSTYDGIVYNVEMLKEMLDGRIDTLHFDEAWLPHAAFHDFYKDMHAIGKDRPQARESMIFATQSTHKLLAG LSQASQILIREPQNRKLNKYIFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGPALVDESIAEALDFRRAMRKVDEEFG LDWWFQVWGPDVIAEEGVGSREDWVLKASDKWHGFGDLAEGFNMLDPIKATIITPGLDVDGDFSDNGIPASMVTKYLAEH GVIVEKCGLYSFFIMFTIGITKGRWNTLLTALQQFKDDYDKNQPLWRILPEFAAKYPRYERTGLRDLCQQIHDAYKLHNV ARMTTEMYLSDMQPAMKPSDAFARMAHEELDRVEIDDLEGRITAVLLTPYPPGIPLLIPGEMFNKTIIDYLKFARDFSQK LPGFETDIHGLVAEEVDGVKRYFVDCVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 7e-106 | 41 |
