Gene Information

Name : Galf_2860 (Galf_2860)
Accession : YP_003848616.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3072806 - 3074677 bp
Length : 1872 bp
Strand : +
Note : KEGG: slt:Slit_2915 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCAACACTAAATTCACCGCTGACGCCGCGCATGTCGATGCCGCCGCGATCAAGCCACTCCCCAATTCCCGCAA
AATTTATGTCGAAGGCAGCCGCCCGGATATCCGCGTGCCGATGCGCGAAATCTCTCAAGCCGACACACCCGATGGCATGG
GCGCTGAAATCAATGCGCCGATTTACGTATACGATTGCTCAGGCCCCTATACCGATCCTGCCGTCAAAATCGACATCCGC
TCAGGCTTAGCACTGATGCGCGAAGCATGGATCGTCGAGCGCGACGACACCGAAGTGTTGCCTAAACTGACTTCCGATTA
CGGCCAGAAACGCCTGGATGATCCGGAGCTCGCCGAGATGCGTTTTAACCTGAGTCGCGCGCCGCGCCGTGCCAAACCGG
GCAAGAATGTCACCCAGATGCACTACGCACGTCAGGGCATCATCACGCCTGAAATGGAATACATCGCGATTCGCGAAAAT
CAAAAAGTCGACGGCATGAACGAGATGATGCTGCGCCAGCATCCCGGGGAAAATTTCGGCAATTCGATGCCAAAAAAAAT
CACGCCTGAATTCGTGCGCGATGAAGTCGCTGCCGGCCGCGCGGTCATCACCGCCAACATCAACCATCCGGAAATCGAAC
CGATGATCATCGGCCGCAAGTTTCTGGTCAAGATCAACGCCAATATCGGCAATTCAGCACTGGGTTCCAGCATCCAGGAA
GAAGTCGAAAAGATGACCTGGGCGATTCGCTGGGGCGGCGACACGGTGATGGATCTGTCCACCGGCAAACACATCCACGA
GACGCGCGAATGGATCATGCGCAATTCTCCCGTGCCGATCGGCACCGTGCCGATTTATCAGGCGCTGGAAAAGGTCAACG
GTAAAGCCGAAGACCTGACCTGGGAAATCTTCCGCGACACGCTGATCGAACAGGCCGAACAAGGTGTGGATTACTTCACC
ATTCACGCAGGCGTCTTGCTGCGCTACGTGCCGATGACCGCGAATCGCATGACCGGCATCGTCTCGCGCGGCGGTTCTAT
CATGGCAAAATGGTGTCTGGCGCACCATAAGGAAAACTTCCTTTACACCCATTTCGAAGACATCTGCGAAATCATGAAGG
CCTATGACGTGACCTTCAGCTTGGGCGACGGTCTGCGCCCCGGTTCGATTTACGATGCAAACGACGAAGCGCAATTGGGC
GAATTGAAGACCCTGGGCGAACTCACCCAAGTTGCCTGGCGCCACGACGTTCAGGTGATGATCGAAGGCCCGGGCCACGT
GCCTATGCATCTGATCAAAGAGAACATGGACTTGCAAGCCAAGTGGTGCAACGACGCGCCGTTCTATACATTAGGCCCTC
TGACCATGGACATCGCGCCGGGCTACGATCACATCACCAGCGCCATTGGCGCTGCGATGATAGGCTGGTTCGGTACCGCT
ATGCTGTGCTACGTCACGCCTAAAGAACACTTAGGCTTGCCGAACAAAGCGGACGTCAAAGAAGGCATCATCACCTACAA
GATCGCAGCGCATGCGGCGGATCTGGCCAAGGGACATCCGGGCGCACAGGTTCGTGACAATGCACTGTCAAAAGCGCGTT
TCGAATTCCGCTGGGACGACCAGTTCAATCTGGGCTTGGATCCTGATCGTGCGCGTGAATTCCATGACGAGACACTGCCG
AAAGAGTCCGCCAAGGTCGCTCACTTCTGCTCGATGTGCGGCCCGCATTTCTGCTCGATGAAAATCTCGCAAGACGTGCG
CGACTTCGCGGCAAAGGAGGGCATCTCGGAACAAGCGGCGCTGGAGAAGGGCATGGAAGTCAAATCCATCGAATTCGTCA
CTAAAGGCAGCCAGCTCTACAGCAAATCCTGA

Protein sequence :
MNANTKFTADAAHVDAAAIKPLPNSRKIYVEGSRPDIRVPMREISQADTPDGMGAEINAPIYVYDCSGPYTDPAVKIDIR
SGLALMREAWIVERDDTEVLPKLTSDYGQKRLDDPELAEMRFNLSRAPRRAKPGKNVTQMHYARQGIITPEMEYIAIREN
QKVDGMNEMMLRQHPGENFGNSMPKKITPEFVRDEVAAGRAVITANINHPEIEPMIIGRKFLVKINANIGNSALGSSIQE
EVEKMTWAIRWGGDTVMDLSTGKHIHETREWIMRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFT
IHAGVLLRYVPMTANRMTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVTFSLGDGLRPGSIYDANDEAQLG
ELKTLGELTQVAWRHDVQVMIEGPGHVPMHLIKENMDLQAKWCNDAPFYTLGPLTMDIAPGYDHITSAIGAAMIGWFGTA
MLCYVTPKEHLGLPNKADVKEGIITYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWDDQFNLGLDPDRAREFHDETLP
KESAKVAHFCSMCGPHFCSMKISQDVRDFAAKEGISEQAALEKGMEVKSIEFVTKGSQLYSKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 77
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 77
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72