Gene Information

Name : Galf_0028 (Galf_0028)
Accession : YP_003845837.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 36338 - 38353 bp
Length : 2016 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: slt:Slit_0014 transketolase; SMART: Transketolase central region

DNA sequence :
ATGACAGCAGATCGTAGCATTACCCCACCAAAATATAACGACATAACCGGCGCAATTCGCATGCTGGCCGTGGACGCCGT
TCAAAAAGCCAACTCGGGTCACCCGGGTGCACCTATGGGCATGGCAGAAATCGCTGACGTACTGTGGAATCACCATCTGC
GTCACAATCCGGCAAATCCTAAGTGGCCAGGTCGTGATCGTTTCATGATGTCCAACGGGCATGGTTCCATGCTGGTTTAT
GCGTTATTGCACTTGTCCGGTTACGATTTGCCTATCGACGAGTTGAAGCGTTTCCGCCAGATGCACTCCAAGACACCGGG
TCATCCTGAATACGGTTACACCGCAGGTGTTGAAACCACTGGCGGCCCGCTCGGTCAAGGGATTACCAATGCAGTCGGTA
TGGCGATGGCTGAAAAATTGCTGGCGGCTGAATTCAACAAGCCGGGTCATGAAATTGTCGATCATCGCACCTATGTATTC
ATGGGCGATGGTTGCATGATGGAAGGGATTTCACACGAAGCGTGTGCGCTGGCTGGTACTTGGGGTCTGGGCAAGCTGAC
TGCATTCTGGGATGACAATGAAATCTCGATCGATGGCCATACCAACGGCTGGTTTACTGACGATACCGCAAAGCGCTTTG
AAGCGTATGGCTGGCACGTTGTTGCGAATGTTGAAGGGCACGACCCTGAAGCGATTAACGCTGCGATCGAAGCGGCTAAA
GCCGTTACCGATAAGCCTAGTCTGATTTGCTGCAAGACCGTTATCGGTGCCGGCTCTCCTAACAAGGAAGGTACGCATGA
CGTTCACGGTGCAGCACTGGGCGACGCCGAAGTTGCGGCTACCCGTGCGCACATCAACTGGCCTTACGCCCCGTTCGAAA
TCCCGCAGCACGTGTACGAAGCATGGGATGCACGCACTAAGGGTGCGGGTCTGGAACAGTTGTGGAACAACAAATTCGCC
GAATACAGCGCAGCTTATCCTGCAGAAGCGGCAGAATTTACACGCCGCACTAAGAACGAATTGCCATCCGGTTGGGCCGC
GCACGCAGCCGCTGCCATCGCAGCGACCAATGCTAAGGGCGAAACCATTGCAACACGCAAGGCATCGCAAAATGCCATCA
ATGCACTGGCTTCTGCATTGCCAGAATTTTTGGGTGGATCAGCCGACTTGACGGGTTCTAACCTGACTAACTGGACAGGT
TGCAAGCATGTTCACGGCAAAACCACGGGTAATTACATCAGCTACGGCGTACGCGAATTCGGTATGTCGCACATCATGAA
CGGTATGGCGTTGCATGGCGGTTTGCTGCCATTTGGCGGCACCTTCCTGATGTTCTCTGAATATGCTCGCAATGCATTGC
GTATGTCCGCATTGATGAAGCAGCGCGTGATTTATGTATTTACCCATGATTCCATCGGTTTGGGTGAAGATGGCCCGACT
CACCAGCCTGTTGAGCAAACAGCAACGCTGCGTCACATTCCTAATATGGAAGTGTGGCGTCCTTGCGACACCGTTGAATC
TATCGTGTCGTGGGTTGCTGCCGTTGAACGCAAAGATGGTCCGTCGAGTCTGATTTTCAGTCGTCAGAATCTGCAATTCC
AGAAGCGTACTGAGGCGCAAATCGCCGATATCCGTAAGGGTGCGTATGTTTTGTCAGAAGCTGCGGGTGGTAAGCCACAA
GCTGTGATTATTGCAACGGGTTCCGAAGTGACGCTGGCACTGGATGCGCAAAAAGCGCTGGCCGAAGCCGGTATCAATGT
TCGTGTGGTTTCTATGCCTTCGACTAATGTGTTTGATAAACAAGATCAAGCTTACAAGGACAGCGTATTGCCGCGCGGCG
TAAATCGCGTTGCGGTTGAAGCGGGTGTGACCGGCGGATGGTACAAGTATGTCGGTCTGGATGGCGCGGTAGTAGGTATG
GATTGCTTCGGCGAATCAGCACCTGCGCCTGAGTTGTTCAAGCACTTCGGCTTTACGGTAGCAAATGTTGTTCAGGCAGT
TAAGGGCGTTCTGTAA

Protein sequence :
MTADRSITPPKYNDITGAIRMLAVDAVQKANSGHPGAPMGMAEIADVLWNHHLRHNPANPKWPGRDRFMMSNGHGSMLVY
ALLHLSGYDLPIDELKRFRQMHSKTPGHPEYGYTAGVETTGGPLGQGITNAVGMAMAEKLLAAEFNKPGHEIVDHRTYVF
MGDGCMMEGISHEACALAGTWGLGKLTAFWDDNEISIDGHTNGWFTDDTAKRFEAYGWHVVANVEGHDPEAINAAIEAAK
AVTDKPSLICCKTVIGAGSPNKEGTHDVHGAALGDAEVAATRAHINWPYAPFEIPQHVYEAWDARTKGAGLEQLWNNKFA
EYSAAYPAEAAEFTRRTKNELPSGWAAHAAAAIAATNAKGETIATRKASQNAINALASALPEFLGGSADLTGSNLTNWTG
CKHVHGKTTGNYISYGVREFGMSHIMNGMALHGGLLPFGGTFLMFSEYARNALRMSALMKQRVIYVFTHDSIGLGEDGPT
HQPVEQTATLRHIPNMEVWRPCDTVESIVSWVAAVERKDGPSSLIFSRQNLQFQKRTEAQIADIRKGAYVLSEAAGGKPQ
AVIIATGSEVTLALDAQKALAEAGINVRVVSMPSTNVFDKQDQAYKDSVLPRGVNRVAVEAGVTGGWYKYVGLDGAVVGM
DCFGESAPAPELFKHFGFTVANVVQAVKGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 65
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 64