Gene Information

Name : Galf_2652 (Galf_2652)
Accession : YP_003848412.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2858024 - 2860081 bp
Length : 2058 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: slt:Slit_0311 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
TTGACGACACCGCTCAAAATCTCTGCTGCGACCCTTACCAAGCTGGCTAAGCTGGGCATCCGCCATCGGGCGGATTTGTT
GTTGCATCTGCCGTTGCGCTATGAGGATGAGACTGAGCTCGTCTCGCTTGCCGACGTTGAACCCGGCGAGACGGTGCAGG
TACAGGGCGTCATCACGCACAACGAGGTCCTGTACAAGCCCAGAAAAATACTGGTTTGCCGCCTACAGGACAAAGAGGAT
GAGCTGTATCTGCGTTTTTTGAATTTCTACCCCAGCCAGATCAAACTGCTGGCGGTAGGCCGCCAAGTACGCGCGATCGG
CGAGGCGAGAATCGGTTATTTCGGGCTGGAGATGGTGCATCCGAAATGCCGGGCGGTGAGCGATAAAACGCAGCTGGCAA
CCAGCCTCACTCCGGTCTATCCGACCACGGCAGGACTGTCGCAACTCACGTTAAAAAAGCTGATTGCCAATGCGTTGGAG
GTGCTCAATCCAGCCGACCCGCTGCCAGAAAAATTTCGCCATAATTTAAATTTACCGGGGTTTTTTGACAGCATCCGACT
GCTGCACAACCCCACAACAGACATCGCCGCATGTACTCTGGCGGATAAAAGTCACGCAGCCTGGCGACGTATCAAATTTG
ATGAGTTACTGGCCCAGCAACTGTCCATGCGCGTGCATCACAAAGAACGCAGCCGGCGCATTGCGCCCGCGCTGCCGCCA
CAGGGCCATTACACCGATAGCCTGCTAAAAATTCTGCCGTTTTCACTGACCAAAGCGCAACAAAAAGTCTACGCGGAAAT
CAGCGCAGACCTTGCCCGCCCGCACCCGATGCAACGCTTACTGCTCGGCGATGTCGGCAGCGGCAAGACCATCGTCGCAG
CACTCGCCGCCTTGCAAGCCATCGAAAATGGCTATCAAGTCGCCTTGATGGCACCCACTGAAATCCTCGCTGAACAGCAT
TATCTCAAGCTGACAGAGTGGTTATCCCCACTAGGAATAGTGCCGGTCTGGCTGTCCGGCAGCCTGAAGAAAAAGGACAA
GCGCGTGGCCGCCGAGTTGATTGCATCGGGCGAAACATGGCTTGCCATCGGCACGCACGCTTTATTTCAGGAACAGATTA
CCTTCCATAAATTAGGGCTGGCGATTGTCGATGAACAGCACAAATTCGGCGTGCAACAACGACTGGCGCTGCATGCGAAA
GGCAAACAGCCCGTAGCACCGGATGAAAAATCCTCTGAGCCGCACCAATTAATGATGAGCGCAACGCCGATTCCACGCAC
GCTGGCGATGAGCTATTACGCGGATCTGGACGTGTCGGTGATCGATGAATTGCCGCCCGGACGCACGCCGGTGATTACCA
AATTGGTGAGCGACACACGCCGCGAAGAGGTATTCGAACGGGTTCGCGCTGCCTGCATGACCGGCGCACAAGCCTATTGG
GTCTGCCCCTTGATCGACGAATCCGAAGTCTTGCAATTGCAAAATGCGCAGGAAACATTTGAATTGCTGACGGACACCTT
TCCGGATCTGCGTGTCGGCCTGGTTCACGGCAAAATGGAAAGCGCCGAAAAGGTGCGCACTATGAGCGCATTCAAGGCAG
GCGAATTGCAGCTGCTAGTTGCGACGACCGTCATTGAAGTCGGCGTGGATGTGCCCAACGCCAGCCTGATGGTGATCGAT
CATGCCGAGCGCATGGGGCTGGCCCAGCTCCATCAACTGCGCGGACGGGTAGGACGCGGATCAGCACAAAGCCTCTGTAT
TTTGCTGTATCACAAACCGCTCTCAGAACTAGCACGCACACGATTAAAAGTCATCTTCGAGAACACCGATGGCTTCGTGA
TTGCCCAGCAGGACTTACAATTGCGCGGCCCTGGCGAATTGCTGGGTGCAAGACAAAGCGGCGTGGCGATGCTGCGCTTC
GCCGACATTGAAGCCGATGAAGATTTACTTGAACACGCACGCGAAGTCGCCGATGAATTATTGAGCGATTATCCGGATGC
GGCGCGCACCTATTTGCACCGCTGGATGGCAAACAAACATGACTATTTGCACGTATAA

Protein sequence :
MTTPLKISAATLTKLAKLGIRHRADLLLHLPLRYEDETELVSLADVEPGETVQVQGVITHNEVLYKPRKILVCRLQDKED
ELYLRFLNFYPSQIKLLAVGRQVRAIGEARIGYFGLEMVHPKCRAVSDKTQLATSLTPVYPTTAGLSQLTLKKLIANALE
VLNPADPLPEKFRHNLNLPGFFDSIRLLHNPTTDIAACTLADKSHAAWRRIKFDELLAQQLSMRVHHKERSRRIAPALPP
QGHYTDSLLKILPFSLTKAQQKVYAEISADLARPHPMQRLLLGDVGSGKTIVAALAALQAIENGYQVALMAPTEILAEQH
YLKLTEWLSPLGIVPVWLSGSLKKKDKRVAAELIASGETWLAIGTHALFQEQITFHKLGLAIVDEQHKFGVQQRLALHAK
GKQPVAPDEKSSEPHQLMMSATPIPRTLAMSYYADLDVSVIDELPPGRTPVITKLVSDTRREEVFERVRAACMTGAQAYW
VCPLIDESEVLQLQNAQETFELLTDTFPDLRVGLVHGKMESAEKVRTMSAFKAGELQLLVATTVIEVGVDVPNASLMVID
HAERMGLAQLHQLRGRVGRGSAQSLCILLYHKPLSELARTRLKVIFENTDGFVIAQQDLQLRGPGELLGARQSGVAMLRF
ADIEADEDLLEHAREVADELLSDYPDAARTYLHRWMANKHDYLHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-102 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_2652 YP_003848412.1 ATP-dependent DNA helicase RecG BAC0356 Protein 7e-153 52