Gene Information

Name : Galf_2346 (Galf_2346)
Accession : YP_003848112.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 2529291 - 2530391 bp
Length : 1101 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: slt:Slit_0652 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGGTTAGCGCGGAAGACAGCCGTTGGATGGCGCAGGCGCTTCAACTGGCAGAGCGCGGCCTTTACAGCACCAGTCCGAA
TCCGCGTGTCGGTTGTGTGCTGGTGCGCGACGGGAATTTGCTGGGGGCGGGCTGGCACAAAAAAGCCGGTGAGCCGCACG
CGGAAGTGTATGCCTTGCTCGATGCGGGCGATGCCGCACACGGTGCGACGGCCTACGTTACGCTGGAGCCTTGCAGTCAT
TACGGCCGTACACCGCCATGTTGCGACGCGCTGATTCATGCTGGTGTCGCGCGTGTCGTGGTGGCGATGCAGGATCCGAA
TCCGCAGGTGGCGGGCCGCGGTATCGCGAAATTGCGTGCAGCGGGAATTTCGGTTGATTGCGGATTGATGGAAGCCGCAG
CGCGTGAGTTGAATGCCGGTTTTTGCGCGCGCATGACGCGCGGGTTGCCGCAAGTCAGAAGCAAAGTCGGTATGAGTCTG
GACGGGCGAACCGCGCTGTCTAACGGCGTCAGTCAGTGGATCACCGGGGCTGATGCAAGGCTTGATGTGCAGCACTGGCG
GGCGCGTTCTTGTGCCGTGTTGACGGGTATCAACACCATTTTGGCCGACGATGCGCAGTTGAATGTGCGAGAAATTGACG
TTGAGCGTCAGCCTAAGCGGGTGGTGCTGGACAGTCATTTGCGCATGCCGCTTGACGCACGCATCTTGCAAGGCGGTGTG
CTGATTTATGCCGCACTGCGAGATGATCATAAAATTGAGCGCCTGCAACAGGCAGGCGCTGAAGTGGTGCTTCTGCCCGG
TACAGACGGGCGGGTGGATTTACCTGCTGTGATGCGCGATCTGGCATCGCGCGGATGCAATGAGATATTGGTTGAGGCAG
GAGCCGTGCTCAATGGCGCGTTGCTGCGCGCGGAACTCGTCGATGAAATGCTGCTGTATATCTCGCCTCAGTTGCTAGGC
AGCAGTGCGCGCGGCATAGCGGCTTTGGGCGAACTGACAGCGCTCGATCAGCGCGTTGATCTTAAATGGCAGGATGTACG
GCAAGTCGGTCGCGATTTACGTATCACTGTTACAGTCAGAAATGACGATAAAGGAGTTTAA

Protein sequence :
MVSAEDSRWMAQALQLAERGLYSTSPNPRVGCVLVRDGNLLGAGWHKKAGEPHAEVYALLDAGDAAHGATAYVTLEPCSH
YGRTPPCCDALIHAGVARVVVAMQDPNPQVAGRGIAKLRAAGISVDCGLMEAAARELNAGFCARMTRGLPQVRSKVGMSL
DGRTALSNGVSQWITGADARLDVQHWRARSCAVLTGINTILADDAQLNVREIDVERQPKRVVLDSHLRMPLDARILQGGV
LIYAALRDDHKIERLQQAGAEVVLLPGTDGRVDLPAVMRDLASRGCNEILVEAGAVLNGALLRAELVDEMLLYISPQLLG
SSARGIAALGELTALDQRVDLKWQDVRQVGRDLRITVTVRNDDKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-67 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-67 49