Gene Information

Name : Galf_2314 (Galf_2314)
Accession : YP_003848081.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2496541 - 2498277 bp
Length : 1737 bp
Strand : +
Note : KEGG: slt:Slit_0685 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGAACACACAACTCGAGCAAGGCGCGCACCAACGTATCGGCGAAGTACTGATCGCACGCGGTCACCTCAACGATGACCA
GTTGCGTATCGCCTTGCAAAAACAAAAAACCGACAACAAGCCGCTGGGTGAAGAGTTACTGGATTTACATTTCATCTCCG
AACAGGCAATGCGGGAAGCCGTCTCTGAAGCGGCAGGTTACAAATCGATCGATCTGGCCGGCAATGTCGCCAATGCAGCA
GCACTCGCCCTGATACCCAAACCGGTCGCCATAAAATACACCCTGTTTCCGATCAGCTTCGACGCCGCTGCGGGCCATCT
GGTCATTGTGGCGGCCAATCCAGACGACATTCTGGCGCGCGATGCGATTTCGCCGTTTCTGGTGCAGGCCAGCCTAATCG
CAGGGCGGCGCATCATCCCCGCCTGGCGCATCGCACCAAGCGCCGAAGTACTGGCAGCAATCGACAAATTTTATGATCAC
GAACTCTCTATCGAAGGCATTCTTTTCGAACTGGAGAGCGGCGAGTTGGACATCAACGCGCTGATGCAGGCGGGCGTGTC
CTACAGCCATCCGATTGTGCGCCTGACCGACGCAATTTTGTCGGACGCCGTCAGTCGCAGTTCATCGGACATACACTTCG
AACCCGAAGAACAGTTTTTACGCGTGCGCTACCGCATCGACGGTGTGTTAAGGCCGGTGCGTTCGCTGTCCAAAACGCAC
TGGATGGCAATACTGGTGCGGCTGAAAGTCCTGTCTGGCATGAACATCGCCGAGACGCGGGCGCCGCAGGACGGCCGTGT
CTCACTGTCGCTGTTCGGCCGGCAGATTGACTTTCGCGCCGCCTCACACCCGACCATCCACGGCGAAAATTTTGTGCTAA
GGATTTTAGACCGCAAGCTTGGCATCGTCAGTCTCGACAAACTGGGCATGACAGACTCACAACTGTCGCTACTCGAACGC
ATGCTCGAACGCCCCGAAGGTATCCTGCTGGTAACAGGCCCCACGGGTTCGGGCAAAACCACCACGCTGTACTCCATCCT
GAGCCACCTCAATAACGATGCGGTGAACATCATGACGCTGGAAGATCCAGTGGAATACCCCATGCCGCTCACCCGGCAAA
CCTCGATTGCCGAGACCATCAAACTGGACTTCTCGAACGGCATCCGCTCCTTGATGCGCCAAGACCCGGATATCATCCTG
GTCGGCGAAATCCGCGACCACGACACCGCCGAAATGGCACTGCGCGCCGCGATGACGGGACATCAGGTGTTCTCGACCCT
GCACACCAATTCGGCAATAGGCTCGGTATCAAGACTGCACGATCTCGGGATTGTGGACGACATGTTTGCCTCCAACCTGA
TCGGCATCATCGCCCAGCGCCTGGTGCGCCGCCTGTGCCCGCTGTGCAAAGTCGGCTATTCTCCCGATGATACCGAACGC
CGCATTATGGGGATCGATCTGAATCTGGAGATCATGATTTACCAGCCGGCGGGCTGCACCGACTGCGAAGATCAAGGCTA
CAAGGGCCGCCTTGCCATCATGGAGCTGCTGCGTTTTGATCGCGGCATCGTCGAGCTGGTCACCCGTCGCGCCGGCCTCA
AAGAATTAACCGACTACGCACTGGCACATCAGTTCGTGCCGCTCGCCGAAGACGGCATCCGCCGCGTGCGCGAAGGGCTC
ACGTCCTTACCGGAAGTGCGTCGCGTCGTCGATTTCAGCGACAGGATGAGTGAATAA

Protein sequence :
MNTQLEQGAHQRIGEVLIARGHLNDDQLRIALQKQKTDNKPLGEELLDLHFISEQAMREAVSEAAGYKSIDLAGNVANAA
ALALIPKPVAIKYTLFPISFDAAAGHLVIVAANPDDILARDAISPFLVQASLIAGRRIIPAWRIAPSAEVLAAIDKFYDH
ELSIEGILFELESGELDINALMQAGVSYSHPIVRLTDAILSDAVSRSSSDIHFEPEEQFLRVRYRIDGVLRPVRSLSKTH
WMAILVRLKVLSGMNIAETRAPQDGRVSLSLFGRQIDFRAASHPTIHGENFVLRILDRKLGIVSLDKLGMTDSQLSLLER
MLERPEGILLVTGPTGSGKTTTLYSILSHLNNDAVNIMTLEDPVEYPMPLTRQTSIAETIKLDFSNGIRSLMRQDPDIIL
VGEIRDHDTAEMALRAAMTGHQVFSTLHTNSAIGSVSRLHDLGIVDDMFASNLIGIIAQRLVRRLCPLCKVGYSPDDTER
RIMGIDLNLEIMIYQPAGCTDCEDQGYKGRLAIMELLRFDRGIVELVTRRAGLKELTDYALAHQFVPLAEDGIRRVREGL
TSLPEVRRVVDFSDRMSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 6e-80 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-80 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_2314 YP_003848081.1 type II secretion system protein E VFG0182 Protein 1e-81 44
Galf_2314 YP_003848081.1 type II secretion system protein E VFG2048 Protein 3e-80 43