Gene Information

Name : Galf_1809 (Galf_1809)
Accession : YP_003847583.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1968714 - 1971299 bp
Length : 2586 bp
Strand : -
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: slt:Slit_2203 ATP-dependent chaperone ClpB; SMART: AAA ATPase

DNA sequence :
ATGCGTTTCGACAAATTTACTACCAAGTTGCAGCAAGCACTGACCGATGCACAGAGTCTGGCAGTCGGTTCAGATTCTCA
GTTTATCGAGCCGCAGCATTTGTTGCTGGCGATGTTGAACGATGCCGACAGTGGTGCCGGATCGCTGCTGGCTCGTGCAG
GGGGCAATGTCAACGCCTTGAAAGTCGCATTGACCGATGCGGTGTCACGTTTGCCTAAAGTGGAAGGACACGGCGGCGAA
GTTCAAGTGGGGCGCGATTTGTCTAATCTGTTTAACTTGACCGACAAGGAAGCGCAGAAGCGCGGCGACCAGTTCATTGC
CAGTGAAATGTTTTTACTGGCCGCAACGGGCGATAAGGGTGAGACAGGGCGCTTGCTAAAAACCCACGGGGTTGCGCGTG
CACCGCTGGAGCAGGCGATTGCTGCGGTACGCGGGGGCGAGTCGGTCGGCTCTCAAGAGGCTGAAGGGCAGCGCGAGTCG
CTTAAAAAATATACGGTCGATCTGACTGAGCGCGCAAGACAGGGAAAATTGGATCCTGTGATCGGGCGGGATGACGAGAT
TCGTCGCGCGATACAGGTGTTGCAGCGCCGCACCAAAAACAATCCGGTGCTGATAGGGGAGCCGGGTGTGGGCAAGACCG
CCATTGTCGAGGGACTCGCGCAGCGCATTGTCAACGGTGAAGTGCCCGAATCCTTAAAGAACAAAAAGGTGCTAAGTCTG
GATATGGCAGCACTGCTGGCAGGCGCTAAGTATCGCGGTGAATTTGAGGAGCGTCTGAAAAACGTGCTCAAAGAGCTGGC
GATGGATGAAGGGAAAACGATCGTCTTTATCGATGAATTACACACCATGGTCGGCGCGGGTAAAGCGGAAGGTGCGATGG
ATGCGGGCAATATGTTGAAACCTGCACTGGCGCGCGGCGAGCTGCACTGTGTGGGTGCGACAACGCTCGATGAGTATCGC
AAGTATATTGAGAAGGATGCCGCTTTAGAACGTCGTTTCCAAAAGGTGCTGGTAGACGAGCCATCGGTTGAATCGACTAT
CGCGATTTTGCGCGGGCTGCGCGAGCGTTACGAGCTGCATCACGGCGTGGATATCACGGATCCTGCCATCATCGCTGCCG
CGGAACTCTCCAACCGCTATATCACCGACCGCTTCTTGCCGGACAAGGCGATCGATCTGATCGACGAGGCGGCCGCGCGC
GTGCGTATGGAGATCGACTCCAAGCCTGAAGTGATGGACAAGCTGGAGCGCCGTTTGATTCAGCTCAAGATCGAACGCGA
AGCGGTTAAGAAAGAAAAGGACGAGGCATCTAAAAAGCGCCATGCGCTGATCGAAGAGGAAATCGCCAAATTGAGCCGTG
AATATGCCGATCTGGAAGAAATCTGGAAGGCTGAAAAGGGCGCAGCACAAGGCACGGCGCAGTTGAAGGAAGAAATTGAC
AGGGTGCGCGCCGAAATCGTCCGTCTGCAAAGGGAAGGGAAACTGGAAAAAGTGGCCGAATTGCAATATGGCCAGTTGCC
TATGATGGAAGCAAAGCTCAAAGAAGCGGCGCAGCGCGAAGCTGAAGGGGGCGTATCAAAGAATAAACTGTTGCGCACTC
AGGTGGGAGCTGAAGAAATTGCCGAAGTGGTGAGTCGCGCGACCGGCATTCCTGTCTCCAAGATGATGACGGGTGAGCGC
GACAAGCTGCTCAAAATGGAAGACAAGTTGCATGAGCGTGTCGTGGGGCAGGATGAGGCGGTGCGGCTGGTGTCGGATGC
GATCCGCCGTTCGCGCTCTGGTTTGTCCGATCCTAATCGCCCCTATGGTTCGTTCCTGTTTTTAGGTCCTACCGGTGTCG
GCAAGACCGAACTGTGCAAGGCACTGGCAGGTTTCATGTTTGACTCTGAAGATCATCTGATCCGCATCGATATGTCCGAA
TATATGGAGAAACATTCGGTCGCGCGTCTGATCGGTGCGCCGCCAGGTTATGTCGGCTATGAAGAAGGCGGTGGCTTGAC
CGAGGCCGTGCGCCGCAAGCCCTATTCGGTGATTCTGCTCGATGAAGTCGAAAAGGCGCACCCTGACGTGTTTAATGTCT
TGCTGCAGGCGCTGGACGACGGGCGCATGACCGACGGGCAGGGGCGCACGGTGGACTTTAAAAATACCGTGATTGTGATG
ACCTCCAATTTAGGTAGTCAGATGATCCAGCAGATGTCGGGTGATGATTATCAGGTGATCAAGCTTGCGGTGATGGGTGA
AGTCAAAACCTATTTCAGGCCGGAGTTTATTAACCGCATCGATGAGGTGGTGGTGTTTCATGCGCTGGATGAGAAGAATA
TCAAGTCCATCGCGGGCATCCAGTTGCAGTATCTGGAAAAACGTCTGGCGGCGATGGAGATGAAGCTGGCAGTGAGTGAG
TCAGCTTTAGCTGAGATTGCGACTGCCGGGTTTGATCCGGTGTATGGTGCAAGGCCGTTGAAGCGTGCCATTCAGTCGCA
ACTGGAAAATCCGCTGGCTAAACTGATATTGGAAGGGCGTTTTGCCGCAAAAGATACGATACAAGTAGATTGCCGGGGCG
GCGTGATGAAATTCGAGAAGGCTTGA

Protein sequence :
MRFDKFTTKLQQALTDAQSLAVGSDSQFIEPQHLLLAMLNDADSGAGSLLARAGGNVNALKVALTDAVSRLPKVEGHGGE
VQVGRDLSNLFNLTDKEAQKRGDQFIASEMFLLAATGDKGETGRLLKTHGVARAPLEQAIAAVRGGESVGSQEAEGQRES
LKKYTVDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKKVLSL
DMAALLAGAKYRGEFEERLKNVLKELAMDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR
KYIEKDAALERRFQKVLVDEPSVESTIAILRGLRERYELHHGVDITDPAIIAAAELSNRYITDRFLPDKAIDLIDEAAAR
VRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASKKRHALIEEEIAKLSREYADLEEIWKAEKGAAQGTAQLKEEID
RVRAEIVRLQREGKLEKVAELQYGQLPMMEAKLKEAAQREAEGGVSKNKLLRTQVGAEEIAEVVSRATGIPVSKMMTGER
DKLLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKALAGFMFDSEDHLIRIDMSE
YMEKHSVARLIGAPPGYVGYEEGGGLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIVM
TSNLGSQMIQQMSGDDYQVIKLAVMGEVKTYFRPEFINRIDEVVVFHALDEKNIKSIAGIQLQYLEKRLAAMEMKLAVSE
SALAEIATAGFDPVYGARPLKRAIQSQLENPLAKLILEGRFAAKDTIQVDCRGGVMKFEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_1809 YP_003847583.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-107 43
Galf_1809 YP_003847583.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-105 41