Gene Information

Name : Galf_1415 (Galf_1415)
Accession : YP_003847204.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : 2.1.1.72
Position : 1544174 - 1545835 bp
Length : 1662 bp
Strand : -
Note : TIGRFAM: type I restriction-modification system, M subunit; KEGG: wsu:WS1136 type I site-specific deoxyribonuclease; PFAM: N-6 DNA methylase

DNA sequence :
ATGACTGTCGTGTTTTTGTGCGTGTTTCGCTTTATCATGCCGCACTCACAAACCATCCTATATGCCATGTCAGAAGAACA
GCGCCGTCAGTTACAGCAACAGCTATGGAATATCGCCAATACCCTGCGCGGCAAGATGGGGGCAGATGAATTCAGGGATT
ACATTCTGGGCTTCATCTTCTACAAATACCTGTCCGAGAAAATCCAACGCTTTGCCGATGCCGAGCTGGCGCAGGAAAAT
CTGCACTTCGCTGCGCTCAAGGAATCCACCGAAGAAGGCCGTGCCTATATCGCCGCGCTGGAAGAAGCTGCTCTGGGTGA
ACTTGGGTATTTCCTGAAGCCATCCGAGCTGTTCCATGCCATCGCCATGAAGGGCAGCAATCAGGAAGATGAACACAAGC
TGGGCGACAGTCACAATTTCATTCTCGCTGACCTGACCCGGATACTGAAGAACATCGAGCAAAGCACCTTGGGTACGGAG
AGCGCCGACGACTTCGTGAACCTGTTTGAAGACTTGGATTTGACATCATCTAAGCTGGGTAACAGCGAGAAGGAGAAGAA
TGCGCTGGTCGCGAAGGTGCTGACCCATCTGGACAAGATCGACTTCAATCTGTCGGATTCAACTGCCGACGTGCTGGGCG
ATGCCTACGAATACCTGATCGGTGAGTTTGCCAGTGGCGCAGGTAAAAAGGCGGGGGAGTTCTACACCCCTCAGCCTGTT
TCAACCTTGCTTGCCAAGCTGGTTACAGCACAAAAGCAAACGCTCAAGAGTGTGTACGACCCGACCTGTGGCAGCGGATC
GCTGTTGCTGCGCGTCAAACGCGAGGCCAAGCAGGTCGATAAAATTTACGGCCAAGAGCTGAACCGCACCACCTACAACT
TGGCGCGGATGAACATGATTCTGCATGATGTTCATTACGCTGATTTCGATATCAAGCAGGAAGACACGCTGGAGCGCCCT
CAACATCGTGAGTTGCGCTTCGATGCCATCGTCGCTAATCCGCCGTTTTCCGCCCAGTGGAGCGCCAGCCAGTTGCACAT
GAGCGATGACCGCTTTTCGGTATATGGCAAACTCGCGCCTGCCAGCAAAGCCGATATGGCCTTTGTGCAGCACATGGTCT
ATCAACTGGCCGAAGAAGGCACGATGGCGGTGGTGTTGCCCCATGGCGTGCTGTTTCGTGGCGCTGCTGAAGGGCATATC
CGCCAATACCTGATTGAGCAGTTGAACTGTCTCGATGCGGTGATTGGCCTGCCTGCCAATATCTTCTACGGCACATCCAT
TCCGACCTGCGTGCTGGTATTCAAGAAATGCCGCAAGAATCCTGACAACATTCTGTTCATTGATGCCAGCCAGCACTTTG
ACAAGGTCAAAACGACCAATGTGATGCGTCCTGAGCATATCCAAAAAATCGTTGATACTTACAAGGCGCGGAGCAACGAA
GAGAAGTATAGTCATGTGGCGAGTATCGAGAGCATCAAGGCCAACGACTACAACCTGAACATTCCGCGTTATGTGGACAC
CTTCGAGGCAGAAGAAGCGATTGATCTGGCAGTTATCTCTGCCCAATTGATCGAACTAGACAAAGCCAGCCTGACGACCG
ATGCCACCATTGCAGCGTTCTGCAAAGAATTAGGCATTGCACCGCCTTTTGCTCAGGTTTAA

Protein sequence :
MTVVFLCVFRFIMPHSQTILYAMSEEQRRQLQQQLWNIANTLRGKMGADEFRDYILGFIFYKYLSEKIQRFADAELAQEN
LHFAALKESTEEGRAYIAALEEAALGELGYFLKPSELFHAIAMKGSNQEDEHKLGDSHNFILADLTRILKNIEQSTLGTE
SADDFVNLFEDLDLTSSKLGNSEKEKNALVAKVLTHLDKIDFNLSDSTADVLGDAYEYLIGEFASGAGKKAGEFYTPQPV
STLLAKLVTAQKQTLKSVYDPTCGSGSLLLRVKREAKQVDKIYGQELNRTTYNLARMNMILHDVHYADFDIKQEDTLERP
QHRELRFDAIVANPPFSAQWSASQLHMSDDRFSVYGKLAPASKADMAFVQHMVYQLAEEGTMAVVLPHGVLFRGAAEGHI
RQYLIEQLNCLDAVIGLPANIFYGTSIPTCVLVFKKCRKNPDNILFIDASQHFDKVKTTNVMRPEHIQKIVDTYKARSNE
EKYSHVASIESIKANDYNLNIPRYVDTFEAEEAIDLAVISAQLIELDKASLTTDATIAAFCKELGIAPPFAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 3e-136 56
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-136 56
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 3e-136 56
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 3e-136 56
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 1e-135 56
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 3e-136 56
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 3e-136 56
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 9e-136 56
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 1e-134 56
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 9e-136 56
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-136 56
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 8e-136 56
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 3e-136 55
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-135 55
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-135 55
ORF6 BAC22943.1 - Not tested etd PI Protein 1e-135 55
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 3e-136 55
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 3e-136 55
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 3e-134 55
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 3e-136 55
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 6e-136 55
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 3e-134 55