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Name : Galf_1221 (Galf_1221) Accession : YP_003847013.1 Strain : Gallionella capsiferriformans ES-2 Genome accession: NC_014394 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1318358 - 1321576 bp Length : 3219 bp Strand : + Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: Protein of unknown function DUF3387; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: bte:BTH_I2740 type I restriction-modification system endonuclease; DNA sequence : ATGATGGCGTTTTTGTCGGAGGCAGCCGTTGAGCTGGCACTACTAGAGCAACTGCGAGGGCTGGGCTACAGCATCGAGCA AGAAGAAAACATCGGCCCAGATGGACATCGCCCTGAGCGTGACAGTCACGACGTGGTCGTGCTGAAGAAGCGATTGGAGG ACGCCGTTGCGTTGCTCAATCCCGGAATGCCATTGGATGCGCGTCAGGATGCGATCCGCAAGGTGATGCAGTCCGAGCTG CCATTAATGCTTGAAGAGAACCGCCGTATCCACAAACTGATGACTGAGGGCGTCGACGTCGAGTATTACGCCGACGACGG AACACTGACCGCAGGCAAGGTTTCCCTCATCAACTTCGAGCGGCCAGAGCAGAACGATTGGCTGGTGGTGAGCCAGTTCG TGGTGATCGCCGGGCAATACAACCGCCGCCCAGACGTGGTGGTGTTCGTTAATGGCCTGCCGCTGGGCGTGATCGAGCTG AAGGCTCCCGGCAGCGGGAACGCAACATTGGTCGGGGCTTTCAACCAGCTGCAGACCTACAAGAAGCAGATCCCGGCGCT ATTCAATACCAACGCACTGCTAGTGACATCGGATGGGATTACCGCGCGCGTCGGCTCGCTGTCTGCCGACCTGGAGCGGT TCATGCCATGGCGCACGACCGACGGCAAAGACGTTGCACCGAAAGGTGCGCCCGAACTCTCGACATTGATCGAAGGCGTT TTCGAGCAGCGCCGCTTGCTCGACATGCTGTGCCACTTTACGGTCTTCGGTGAGACGGGCTCGGGCTTGGCGAAGATCAT CGCGGGCTATCACCAGTTTCACGCAGTCATCCGCGCGGTCGATTCGACCCTTCGCGCATCAAGCCAATGGCAGGGCGTGC AAGAAGATCCGCGCGACTACGGCTTACCCAGCGTCAAGACCCAAGCCAAAGGTGACAGAAGAGCTGGGGTAATCTGGCAC ACACAAGGCTCCGGCAAAAGTCTGTTGATGGCGTTCTACGCTGGGCAGCTGGTCAAACATCCGGCGATGGCCAATCCAAC GCTCGTAGTACTGACCGACCGTAACGATCTCGATGACCAGTTGTTCGCCACCTTCTCGATGTGCCGCGACCTGATTCGGC AAACACCGGTACAGGCTGACAGCCGCGAAGACTTGACTAAACTTTTGGCGCGGGCATCTGGCGGCGTGATTTTTACAACC TTGCAAAAGTTTGGCGAGACAAGTCAGGCGCTGACAGACCGTCGCAATGTGGTTGTGATCGCTGATGAAGCGCACCGTAG CCAATATGGCTTTCGGGCCAAGGTGGATGCCAAAACGGGTGAGATTTCCTACGGGTTCGCCAAGTACCTGCGCGACGCGC TGCCCAACGCGTCGTTCATTGGTTTTACCGGAACGCCCATTGAGGCCGACGATGTGAACACCCCGGCGGTGTTCGGCAAT TACATCGACGTTTACGATATCAGCCGAGCAGTCGAGGACGGCGCGACAGTGCCGATCTACTACGAGTCGCGGCTCGCTCG CATTGAACTTGATGAGGACGAGAAACCCAAGATCGATGCCGAGGTCAACGAACTCACAGAAGACGATCCGGAGGTTGAGC AAGAACGCTTCAAGCGCAAATGGTCAACAGTAGAAGCCTTGGTGGGCAGCGATAAGCGCCTCGCGCTGGTTGCGCAAGAC ATGGTTACCCACTTCGAGGATCGCGTTGCTGCGCTGGACGGAAAAGCGATGGTTGTTTGCATGAGCCGTCGCATCTGCGT GAAGCTGTATGACGAGATCGTGAAGCTCCGTCCAGACTGGCACAGTGCCGATGACAACGCGGGGGCGGTCAAAATTGTGA TGACGGGCGCTGCCAGCGACCCCGAAGACTGGCAGCAGCACATCGGCAACAAGGCCCGCCGCGATCTGCTGGCCAAGCGC GCTCGCGACGCCAAAGACCCGCTCAAGCTGGTGATCGTGCGAGATATGTGGCTTACCGGGTTTGATGCGCCCTGCATGCA CACGATGTACGTGGACAAGCCGATGCAGGGGCACGGCTTGATGCAGGCGATTGCGCGGGTGAATCGTGTGTTCCGCGACA AGCCTGCCGGGTTGATCGTCGACTACATCGGTATCGCCCAGAACCTGAAATCGGCGCTTCAGCAATACTCGAAGAACGAC CAGGAAAACACCGGCGTCGACGAGTCGCAGGCCATCGCCGTGCTGATGGAAAAGTACGAAGTCGTGCGCGACATGTACCA CGGCTTCGACTACGCCTCAGCAATGGGCGGAACACCTCAAGAACGCTTGGCAATGATGGCCGGTGCAATTGAGTGGATTC TCGACATGCAGCAAAAGTTGGCGGCGAAGGAGAAAACCAAGGACGGCAAAAAGGATGCGCATCGCCGCTATCAGGATGCC GTGCTTGCGTTGTCCAAGGCGTTCTCCCTTGCATCGGCATCCGACGAGGCCCGCGAAATCCGAGAGGAAGTGGGCTTCTT CCAGGCAATTCGCGCGGCGCTGGTAAAGAGCAGTACCGGGTCGGGCGTGACTCAGCAAGAGCGTGAACTGGCAATCCAGC AGATCGTGAGTCGCGCCGTAGTTTCCACCGAGATTGTCGACATCCTCGCTGCCGCCGGGATCAAGAGCCCGGACATCTCG ATCTTGTCAGACGAGTTCCTGGCCGAAGTTCAGCAGATGGAGCGCAAGAACCTCGCTCTCGAAGCGTTGCGGAAATTGAT CAACGATGGCATCCGCTCCCGCAGCAAATCCAACGTCGTGCAGACCAAGGCTTTCTCAGAGCGGTTGGAAGATGCTGTCG CGCGGTATCACGCCAATGCGATCACCACCGCTGAGGTCTTGCAGGAGTTGATTGATCTCGCTAAGGATATTCGGGCAGCT CGTCAGCGTGGTGAAGAGCAAGGTTTGTCCGAGGATGAAATTGCTTTCTACGACGCGCTGGCCGAGAACGAGAGCGCGAT TCAAATGATGGGTGACGACAAACTGAAACTTATCGCACACGAGTTGTTAGTCAGCCTGCGCGAGAACGTATCTGTGGATT GGGCGCATCGTGATTCTGCCCGCGCACGGATGCGAGTGCTGGTGAAGCGCATTCTGCGCAAGTATGGTTACCCGCCTGAT CTGCAGGACGCGGCCGTGCAAACGGTACTGCAGCAGGCCGAGGCATTGTCGTCGACGTGGAGCATGCCGAGACCTGGCAG AGGAGATGGCCATGGCTGA Protein sequence : MMAFLSEAAVELALLEQLRGLGYSIEQEENIGPDGHRPERDSHDVVVLKKRLEDAVALLNPGMPLDARQDAIRKVMQSEL PLMLEENRRIHKLMTEGVDVEYYADDGTLTAGKVSLINFERPEQNDWLVVSQFVVIAGQYNRRPDVVVFVNGLPLGVIEL KAPGSGNATLVGAFNQLQTYKKQIPALFNTNALLVTSDGITARVGSLSADLERFMPWRTTDGKDVAPKGAPELSTLIEGV FEQRRLLDMLCHFTVFGETGSGLAKIIAGYHQFHAVIRAVDSTLRASSQWQGVQEDPRDYGLPSVKTQAKGDRRAGVIWH TQGSGKSLLMAFYAGQLVKHPAMANPTLVVLTDRNDLDDQLFATFSMCRDLIRQTPVQADSREDLTKLLARASGGVIFTT LQKFGETSQALTDRRNVVVIADEAHRSQYGFRAKVDAKTGEISYGFAKYLRDALPNASFIGFTGTPIEADDVNTPAVFGN YIDVYDISRAVEDGATVPIYYESRLARIELDEDEKPKIDAEVNELTEDDPEVEQERFKRKWSTVEALVGSDKRLALVAQD MVTHFEDRVAALDGKAMVVCMSRRICVKLYDEIVKLRPDWHSADDNAGAVKIVMTGAASDPEDWQQHIGNKARRDLLAKR ARDAKDPLKLVIVRDMWLTGFDAPCMHTMYVDKPMQGHGLMQAIARVNRVFRDKPAGLIVDYIGIAQNLKSALQQYSKND QENTGVDESQAIAVLMEKYEVVRDMYHGFDYASAMGGTPQERLAMMAGAIEWILDMQQKLAAKEKTKDGKKDAHRRYQDA VLALSKAFSLASASDEAREIREEVGFFQAIRAALVKSSTGSGVTQQERELAIQQIVSRAVVSTEIVDILAAAGIKSPDIS ILSDEFLAEVQQMERKNLALEALRKLINDGIRSRSKSNVVQTKAFSERLEDAVARYHANAITTAEVLQELIDLAKDIRAA RQRGEEQGLSEDEIAFYDALAENESAIQMMGDDKLKLIAHELLVSLRENVSVDWAHRDSARARMRVLVKRILRKYGYPPD LQDAAVQTVLQQAEALSSTWSMPRPGRGDGHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
