Gene Information

Name : Galf_1166 (Galf_1166)
Accession : YP_003846958.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1260207 - 1261373 bp
Length : 1167 bp
Strand : +
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: slt:Slit_1377 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation

DNA sequence : 
ATGAAAATTGCTATCGCCGGTACAGGTTACGTTGGACTTTCCAACGCGATTTTGCTTTCCCAACACAATGAAGTGGTGGC
CATCGACATCATCCCCGAAAAGGTTGCGATGCTCAACCGCAAGCAGTCGCCTATCGAAGATGTCGAAATCGAGGATTACT
TGCAGCACAGGACACTCAACTTCAGGGCGACGCTCGACAAAGTGGACGCCTATACTGGTGCCGATTATGTGATCATCGCG
ACGCCCACAGATTACGATCCGGAAACTAACTATTTCAATACAAAATCGATCGAGTCGGTCATCAAAGACGTGACCGCGAT
CAATCCGCAGGCCGTGATGATCATCAAGTCCACGGTACCGGTGGGGTACACCGCCAAGCTAAAACAAACGACCGGTTGCG
AAAACCTGATCTTTTCGCCCGAGTTCTTGCGTGAAGGCCGTGCGCTTCACGACAACCTGTATCCGTCGCGCATCGTCATC
GGCGAGCGTTCGAAGCGCGCCGAAATTTTCGCCGGTTTGCTCAAGCAGGGCGCCGTCAAACAGAATATCGACACGCTGTT
CACCGACTCTACTGAAGCAGAAGCCATCAAGCTGTTTGCTAATACCTTTCTTGCGATGCGCGTAGCCTATTTCAATGAAC
TCGATACCTATGCGGCCACACACGGATTGGATAGCAAACAAGTCATTGATGGCGTCTGTCTTGACCCGCGCATAGGTGAC
CATTACAACAATCCATCATTTGGTTACGGTGGCTACTGCCTGCCTAAAGACACCAAGCAACTGCTGGCTAACTACAACGA
CGTGCCACAAAACATCATGCAAGCCATTGTGGATAGCAACACCACCCGCAAAGACTTCATTGCCTTCGATATCATCAAAC
GCAAGCCGAATATCGTCGGCATCCACCGCCTGATCATGAAAGCCGGCTCAGATAACTTCAGGGCATCGAGCATACAAGGC
ATCATGAAGCGCATCAAGGCTAAGGGAATTGAAGTCATCGTCTATGAGCCCGCGTTGCACGAATCACAGTTTTTCCATTC
GCGTGTCGTGAATGATCTGGCGCAATTTAAAAAAGAAGCCGATGTGATCGTCGCTAACCGTATGAGCACCGATTTGTCGG
ATGTGGAGGCTAAGGTTTATACCCGCGACTTGTTCGGCAGCGATTGA

Protein sequence : 
MKIAIAGTGYVGLSNAILLSQHNEVVAIDIIPEKVAMLNRKQSPIEDVEIEDYLQHRTLNFRATLDKVDAYTGADYVIIA
TPTDYDPETNYFNTKSIESVIKDVTAINPQAVMIIKSTVPVGYTAKLKQTTGCENLIFSPEFLREGRALHDNLYPSRIVI
GERSKRAEIFAGLLKQGAVKQNIDTLFTDSTEAEAIKLFANTFLAMRVAYFNELDTYAATHGLDSKQVIDGVCLDPRIGD
HYNNPSFGYGGYCLPKDTKQLLANYNDVPQNIMQAIVDSNTTRKDFIAFDIIKRKPNIVGIHRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVIVYEPALHESQFFHSRVVNDLAQFKKEADVIVANRMSTDLSDVEAKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-88 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_1166 YP_003846958.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-97 54