Gene Information

Name : Galf_1066 (Galf_1066)
Accession : YP_003846860.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1121893 - 1123395 bp
Length : 1503 bp
Strand : -
Note : TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: slt:Slit_0595 flagellar protein export ATPase FliI; SMART: AAA ATPase

DNA sequence : 
ATGGTTGAAGACACCGAACTGACGCTCCGGACTGAACCGTTCGCCGCGCCCCAGATCCTGCCCCCGATCTACGATCGGCC
CAGCCCCCAGCCATCTCTCCCCAGCGGCGAGCACAGTCTGCGCTGGCAAGCGCTGCTAACAGAGGGGCGCGAATATGTGG
CCGACTGCAATCCTATGCCCCCTAGCGGTCATCTGACCAAGGTGACAGGCTTGATTATGGAAGCGGTTGGCTTGCAAATG
CCTGTTGGCAGCACCTGTCAAATCCGCCTGCCCAATACCACCGTCGAAGCAGAAGTAGTTGGTTTTTCCGGCGAGAAACT
CTTTTTAATGCCGGAGAATGACGTTTATGGCCTGGTTCCCGGCGCCCGTGTGATGCCAATTACACCCTTACACACACTAA
GCCTTGCCGGCAAACGAAAACCGCTGCGCCGCCGCATGTCGGATCATGCCAAACACCTTCCCGTCGGCAACATGCTGCTC
GGTCGTGTTTTGGATGGTGCGGGAAAACCGCTCGATCAACTGGGCCCGTTGCTGGAAACGGCTTCTGCGCCGTTGCAAAG
CCGCCCTTTCAACCCTTTGGAACGCGCTTCTATCGATACGCCGCTGGATGTCGGCGTGCGCGCCATTAACGCACTCCTGA
GCGTTGGACGCGGTCAGCGCATGGGACTGTTTGCCGGCAGCGGCGTGGGTAAAAGCGTTTTACTTGGCATGATGGCGCGC
TACACCAGCGCGGATGTCACCGTAGTCGGCCTGATAGGCGAACGTGGACGCGAAGTAAAAGAGTTCATCAACGACATTTT
GGGTCCTGAAGGCATGGCGCGTTCAGTGGTGGTTGCCACCCCCGCCGACACGTCCCCCCTGATGCGATTGCAGGGCACGG
CCTATGCGACAACCATCGCAGAATATTTTCGCGATCAGGGAAAAAACGTGCTGCTGATCATGGACTCGCTGACGCGTTTT
GCAATGGCGCAACGCGAAATCGCGCTGGCAGTCGGCGAACCGCCAGCCACCAAAGGATACCCGCCATCCGTATTTGCCAA
ACTTCCCCAACTGGTCGAGCGCGCTGGAAACGGGCTAGAGGGCGGCGGGTCAATCACAGCTTTTTACACCGTACTAACTG
AAGGAGATGATCAACAGGATCCGATTGCCGACAGCGCACGGGCCATTTTGGACGGACATATTGTATTGTCGCGCCGGCTG
GTGGAGCAGGGACACTACCCGGCGATCGATATCGAAGCCTCGATCAGCCGCGTAATGTCACGCCTGGCGACGCCTGAGCA
CGCAGCACTAGTACAACGCTTCAAGCAACTGTATGCTCACTACCAGCGCAACAGAGATCTGATCAGCGTCGGTGCCTATA
TTAACGGGAGCGATCCGCTGCTCGATGAGGCGATCAAACTATACCCGAAAATGGAACAATTTTTGAAACAAGGCATGCAT
CAGTGCGAAACTTACACGAGCAGTATCGCGCAGTTAACCGCGCTGTTTGAAGTCGGATATTGA

Protein sequence : 
MVEDTELTLRTEPFAAPQILPPIYDRPSPQPSLPSGEHSLRWQALLTEGREYVADCNPMPPSGHLTKVTGLIMEAVGLQM
PVGSTCQIRLPNTTVEAEVVGFSGEKLFLMPENDVYGLVPGARVMPITPLHTLSLAGKRKPLRRRMSDHAKHLPVGNMLL
GRVLDGAGKPLDQLGPLLETASAPLQSRPFNPLERASIDTPLDVGVRAINALLSVGRGQRMGLFAGSGVGKSVLLGMMAR
YTSADVTVVGLIGERGREVKEFINDILGPEGMARSVVVATPADTSPLMRLQGTAYATTIAEYFRDQGKNVLLIMDSLTRF
AMAQREIALAVGEPPATKGYPPSVFAKLPQLVERAGNGLEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRL
VEQGHYPAIDIEASISRVMSRLATPEHAALVQRFKQLYAHYQRNRDLISVGAYINGSDPLLDEAIKLYPKMEQFLKQGMH
QCETYTSSIAQLTALFEVGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-86 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-86 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 5e-87 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-87 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-87 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-85 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-86 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-85 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-87 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-72 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-73 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-73 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-73 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-73 46
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-70 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-84 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-74 43
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-72 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-65 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-68 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-68 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-66 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-68 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-70 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-70 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-70 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 3e-61 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 3e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-135 66
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG2499 Protein 2e-146 63
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-127 62
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG0515 Protein 4e-73 46
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-86 45
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG0192 Protein 3e-88 45
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG0048 Protein 6e-88 45
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG0390 Protein 3e-82 45
Galf_1066 YP_003846860.1 flagellar protein export ATPase FliI VFG1778 Protein 7e-62 43