Gene Information

Name : Galf_1059 (Galf_1059)
Accession : YP_003846853.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1116938 - 1117687 bp
Length : 750 bp
Strand : -
Note : KEGG: slt:Slit_0588 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGCGCCGTAGTCTGTTACTGTTACTCGGTGCGGCAGGACTCGTATTAAGCCACGGCATATGGGCTGCTGATCTGGCGGT
GCCTGCAATCACCAGCAAGGCTGCGGCAGGCGGCGGCCAATCCTACAGCCTAAGCCTGCAAACGCTGCTAATACTCACCT
CCTTGAGTTTCTTGCCGGCGATGCTGCTGATGATGACCTCCTTCACACGCATTATCATTGTGCTCAGCATGTTGCGCTCC
GCGCTGGGCACTCAGGCCTCGCCCCCCAATCAGGTACTGATCGGCCTGTCGCTGTTCCTGACATTTTTCATCATGTCGCC
GGTATTCGATAAAATTTACACCGACGCTTATTTACCCTACAGCGAAAATCGGATTGAACTGCAAGAGGCTGTTGAAAAAG
GCGTCATTCCACTCAAGACCTTCATGTTACGCCAGACACGTCAGGCCGATTTAGCACTGTTCGTTAAAATCTCCAACAGC
GACGAGTTACAAAGTGCAGAAGAAGTCCCGATGCGACTCCTAGTCCCGGCCTACGTAACCAGCGAATTAAAAACCGCCTT
TCAGATCGGCTTCGTCGTATTTATTCCATTTCTGATCATCGATATGGTGGTGGCAAGCATCCTGATGTCGATGGGAATGA
TGATGCTCTCCCCCTCTATCATCTCGCTCCCCTTCAAGATTATGTTGTTCGTTTTAGCTGATGGATGGAACCTGCTCATC
GGCTCACTGGCGCAAAGCTTTTACACCTAG

Protein sequence :
MRRSLLLLLGAAGLVLSHGIWAADLAVPAITSKAAAGGGQSYSLSLQTLLILTSLSFLPAMLLMMTSFTRIIIVLSMLRS
ALGTQASPPNQVLIGLSLFLTFFIMSPVFDKIYTDAYLPYSENRIELQEAVEKGVIPLKTFMLRQTRQADLALFVKISNS
DELQSAEEVPMRLLVPAYVTSELKTAFQIGFVVFIPFLIIDMVVASILMSMGMMMLSPSIISLPFKIMLFVLADGWNLLI
GSLAQSFYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-19 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-19 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-19 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Galf_1059 YP_003846853.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-60 71
Galf_1059 YP_003846853.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-59 69
Galf_1059 YP_003846853.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-51 67
Galf_1059 YP_003846853.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-46 58
Galf_1059 YP_003846853.1 flagellar biosynthetic protein FliP VFG0394 Protein 3e-22 41