Gene Information

Name : Clocel_0890 (Clocel_0890)
Accession : YP_003842424.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 1084978 - 1085628 bp
Length : 651 bp
Strand : +
Note : KEGG: cbi:CLJ_B2917 capsular exopolysaccharide family protein; TIGRFAM: capsular exopolysaccharide family

DNA sequence : 
ATGAATAATAATAGATTAATCACTGTAGAGCATCCTAATTCTCAAATTTCAGAAGCCTACAGAACATTAAGGACAAATAT
TCAATTTTCATCCTTGGATAAGAATGTAAAAACAATTGTTGTTACTAGCTCTGTAGCAGGGGAAGGTAAGTCTACCACCT
GTGCTAATTTGGGTGTAGTCATGGCTGAAAACGGATATAACACTATTTTGATTGATTGCGATTTTAGAAATCCAAGCCTT
CATAGGCAATTTAATATACCAAATAGAAAAGGACTACTAGGCTTTTTGGAAGGTAACGCATTGTTTTCGGAATCAGTTCA
AAAGACAAAAGTATCTAACTTAGATATAGCTATGGTTGGAACAAAAGCCAACAATCCATCTAAGTTAATTTCATCTGAAA
AGCTTAAGAATCTTATTGAGGATTTGAAGGAGACTTATGATTATATAATAATAGATACGCCACCTGTGACAATAGCAACA
GATGCTCAATTACTTTCTACTTATGCAGATGGATGTGTTCTTGTAGTTGCTTCGTCACAAGTAGAAAAAGCTGCAGCTCT
AAAAGCAAAGGCGCTTTTAGAGAAAGTAAAAGCTAAGATATTAGGAGTAGTATTAAATAAGTTGGATGTTAAACAGAATG
GTTATTACTGA

Protein sequence : 
MNNNRLITVEHPNSQISEAYRTLRTNIQFSSLDKNVKTIVVTSSVAGEGKSTTCANLGVVMAENGYNTILIDCDFRNPSL
HRQFNIPNRKGLLGFLEGNALFSESVQKTKVSNLDIAMVGTKANNPSKLISSEKLKNLIEDLKETYDYIIIDTPPVTIAT
DAQLLSTYADGCVLVVASSQVEKAAALKAKALLEKVKAKILGVVLNKLDVKQNGYY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-28 43
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_0890 YP_003842424.1 capsular exopolysaccharide family protein VFG1298 Protein 9e-30 43
Clocel_0890 YP_003842424.1 capsular exopolysaccharide family protein VFG1368 Protein 3e-22 41