Gene Information

Name : Clocel_0872 (Clocel_0872)
Accession : YP_003842406.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1064931 - 1065737 bp
Length : 807 bp
Strand : +
Note : KEGG: cbe:Cbei_3760 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGCTGAAAAACAACAATTATTTGAAGCAAAAGAAATAGTAACTGGATATAATAAAAAGATTATAATTGATGGAATTGA
TATAACTATTCCAAGTAATAAAATTAGTGTTATCATCGGAGCTAATGCATGTGGCAAATCAACTTTACTCAAAACCCTTG
CTAGACTTATTAAGCCTGTTTCAGGAAAGGTTGTAATTGATGGTAAAAAAATTACGTCAATGCCCTCTAAACAATTAGCA
CAAGTTTTAGGTTTACTTCCTCAATCCCCAGTAGTTCCAGAGGGTATAACTGTTTGGGATTTAGTTTCAAGAGGTAGATA
TCCATATCAATCCTTTTTGAAAAGTATGGACAAAAGTGATTTTGAAGCTGTAGAAGAAGCTCTTGAAATAATGGGAATAA
CAGAACTTGCTAATCGTAGTGTAGATGAGTTATCTGGGGGGCAGCGTCAGAGAGTATGGATTGCTATGGCACTTGCTCAG
CAAACAGATATACTTCTTTTAGATGAACCAACCACTTATCTTGACATTGCTTATCAAGTGGAAATTCTTGATTTATTAAC
AGATTTAAATCGCAAAAGAGGGACTACTATTGTAATGGTACTTCATGATATAAATTTATCTGCTAGATATGCAGATTATA
TATTTGCTCTTCGTCAAGGTAAACTAATTGATCAGGGTACACCATCGGAGGTTATAACATCTGAATTAATAAGTACGGTG
TTTGGATTAGAGTGTATGGTTATACAAGATCCGGTATCCAATTCGCCTTTCATAGTACCAATAGGAAGACATCATAATAA
TTACTAA

Protein sequence : 
MAEKQQLFEAKEIVTGYNKKIIIDGIDITIPSNKISVIIGANACGKSTLLKTLARLIKPVSGKVVIDGKKITSMPSKQLA
QVLGLLPQSPVVPEGITVWDLVSRGRYPYQSFLKSMDKSDFEAVEEALEIMGITELANRSVDELSGGQRQRVWIAMALAQ
QTDILLLDEPTTYLDIAYQVEILDLLTDLNRKRGTTIVMVLHDINLSARYADYIFALRQGKLIDQGTPSEVITSELISTV
FGLECMVIQDPVSNSPFIVPIGRHHNNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-73 59
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-73 59
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-61 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-45 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-49 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-49 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-33 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-49 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-49 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-49 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_0872 YP_003842406.1 ABC transporter BAC0164 Protein 2e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_0872 YP_003842406.1 ABC transporter VFG0925 Protein 3e-64 50
Clocel_0872 YP_003842406.1 ABC transporter VFG1042 Protein 2e-45 44