Gene Information

Name : Clocel_0870 (Clocel_0870)
Accession : YP_003842404.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1062905 - 1063903 bp
Length : 999 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: cbe:Cbei_3762 transport system permease protein

DNA sequence : 
ATGAAGCTTACAAAAATAATAGGTATATATTTAGCGACTTTTGCTATCCTAGGCATCTGCGTACTTGCATCATTAGCTTG
GGGATCAAAAAATATAGGATTTGGCCAAGCTATAAATGCTTTATTACATACTGATGATACGTCTTTTGCTGCATTAGTGG
TTCGTGAGCGTATACCAAGAACTATTTTTAGTATTATGGCAGGGGCTTCTCTTGGAATATCAGGAGCCCTTATGCAATCA
ATAACTAGAAATCCAATAGCAGATCCAAGTATCCTAGGAGTTAACACAGGTGCATCTTTATTTGTTGTAATTGGAATAGC
ATTTTTTAATATAAATTCACCAAATCAATATATTTGGCTTGCACTAGCTGGAGCTGGTATAACATCAGTATTTGTTTATG
TTGTAGCTTCTATTGGTAATGGTGGAATGACTCCGATAAAGCTTGCTTTAGCAGGGGCTGCTACTAGTGCTGTTTTATCA
TCGTTAGTAAGCGCAGTTATACTTCCAAGAAGTGAGGTTATGGATGCATTTAGATTTTGGCAGGTTGGCAGTGTAAGTGG
TGCTACTTGGGAGAGCATTAGTTTAATATTACCATTTATAATAATTGGGTTAATAATAAGTATAGCAGTAACACCAGCGT
TAAATGTTTTAGCCTTAGGTGACGATGTTGCAACTGGTTTAGGTGTAAATATAGGTATTATAAGAGTTATATGTGCAACT
GCAGGCGTTATATTATCCGGCGCCACTACCGCAATTGCTGGACCAATTGGATTTATAGGCCTAATGATACCACATAGTAT
ACGTCTTATTTTTGGTTCGAATTTGAAAGGGATAGTTCCTTTATCAGCTATTGGAGGAGCGATGCTTTTAATAATTTCAG
ATGTTTTAGGACGAGTAATTGGAAGTCCCGGTGAAGTTCAAGTGGGAATTATCACAGCATTTTTAGGAGCTCCAATTCTT
ATTATCATTGCTAGGAAAGCGAAGGTGAGAGCTATATGA

Protein sequence : 
MKLTKIIGIYLATFAILGICVLASLAWGSKNIGFGQAINALLHTDDTSFAALVVRERIPRTIFSIMAGASLGISGALMQS
ITRNPIADPSILGVNTGASLFVVIGIAFFNINSPNQYIWLALAGAGITSVFVYVVASIGNGGMTPIKLALAGAATSAVLS
SLVSAVILPRSEVMDAFRFWQVGSVSGATWESISLILPFIIIGLIISIAVTPALNVLALGDDVATGLGVNIGIIRVICAT
AGVILSGATTAIAGPIGFIGLMIPHSIRLIFGSNLKGIVPLSAIGGAMLLIISDVLGRVIGSPGEVQVGIITAFLGAPIL
IIIARKAKVRAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 5e-49 51
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 6e-49 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_0870 YP_003842404.1 transport system permease VFG0926 Protein 3e-26 41