Gene Information

Name : Clocel_0584 (Clocel_0584)
Accession : YP_003842119.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 723835 - 724512 bp
Length : 678 bp
Strand : +
Note : KEGG: cac:CAC3560 ABC-type transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGAGTTACGTAATTGAAGTAGAAGATTTACATAAGAGCTATCAAATGGGGGATATGTCTGTTGATATTCTTAAAGGTAT
AAGCTTGAATATCTCTTTAGGAGAATTTGTTTCAATAATGGGACCTTCAGGTTCTGGAAAAAGTACATTGCTTTATCTTT
TAGGAGGTCTAGATAAACCAACAAAAGGAAGCATAAAAATAAAAGGTTCTGATATTGCAAAAATGAATGATAAAGCTGAG
AGTATAATGAGAAGAAGAGAAATTGGTTTTGTGTTTCAGTTTTATAATCTAATACCTAACTTAACTGTTGAAGAAAACAT
AATGCTTCCTCTTTTGCTAGATGGCAAAAAGACAAATAAGTATAAAAAAGAGCTCAATGATATTCTTGAAATAGTAGGAC
TTACAGAAAGAAGAAACCATACACCAAGAGAACTATCTGGTGGACAGCAGCAAAGAGTTGCAATTGCAAGGGCATTAATT
AATGAGCCAGATATTATATTAGCTGACGAACCTATCGGAAATCTTGATTCCAAAACTGGAAATGAGATAATGAATCTTTT
CCAAAAAATAAATAAGGAAAAGGGAAAAACTATTGTCCAAGTTACGCACTCTATAGAATCTGCTGGCTTTGGTCAAAGAA
TAATAAATGTTAGAGATGGAAAGGTGGAAAATATCTAA

Protein sequence :
MSYVIEVEDLHKSYQMGDMSVDILKGISLNISLGEFVSIMGPSGSGKSTLLYLLGGLDKPTKGSIKIKGSDIAKMNDKAE
SIMRRREIGFVFQFYNLIPNLTVEENIMLPLLLDGKKTNKYKKELNDILEIVGLTERRNHTPRELSGGQQQRVAIARALI
NEPDIILADEPIGNLDSKTGNEIMNLFQKINKEKGKTIVQVTHSIESAGFGQRIINVRDGKVENI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-41 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-41 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_0584 YP_003842119.1 ABC transporter CP001581.1.gene598.p Protein 4e-47 50
Clocel_0584 YP_003842119.1 ABC transporter CP001581.1.gene798.p Protein 3e-48 50
Clocel_0584 YP_003842119.1 ABC transporter NC_012469.1.7686878. Protein 3e-47 50
Clocel_0584 YP_003842119.1 ABC transporter NC_008702.1.4606598. Protein 2e-38 45
Clocel_0584 YP_003842119.1 ABC transporter NC_012469.1.7685735. Protein 5e-40 41
Clocel_0584 YP_003842119.1 ABC transporter NC_012469.1.7686946. Protein 1e-25 41