Gene Information

Name : Clocel_4330 (Clocel_4330)
Accession : YP_003845751.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 5207925 - 5208452 bp
Length : 528 bp
Strand : -
Note : PFAM: protein of unknown function DUF163; KEGG: cbe:Cbei_5057 rRNA large subunit methyltransferase

DNA sequence : 
ATGCCTGGAGTTATTTTTTTATCAGAAATAACAAGAGGGAGTTTGAAAATGAAGATAACATTAGTAACAGTAGGAAAGTT
AAAGGAAAAGTACTTAAAGGAAGCTATAAGTGAGTATTCAAAACGGTTAAGTAGATACTGTAAATTAGATATAATTGAAG
TAAATGATGAAAAAACTCCTGACAATGCTTCTGAAAAGGAAGAAATTTTGATAAAGAATAAAGAAGGAGAGGCTATATTA
AAGCACATTAAGGATAATATGCTTGTGGTAGCTATGGATTTGAAGGGTAAAATGTTGTCCTCTGAAGAATTTGGAACTTT
TATTAAGGATGCAGGGGTTAGAGGTAATAGTGATATTGCTTTTATTATCGGTGGTAGTTTAGGGATTAGTGATGAGGTTT
TAAGAAGAGCAGATCATAAGCTGTGTATTTCTAAGATGACTTTTCCTCACCAACTTTTTAGGGTTATCTTGTTGGAGCAG
ATTTATAGAGGGTTTAGGATTATTAATGGGGAACCGTACCATAAGTAA

Protein sequence : 
MPGVIFLSEITRGSLKMKITLVTVGKLKEKYLKEAISEYSKRLSRYCKLDIIEVNDEKTPDNASEKEEILIKNKEGEAIL
KHIKDNMLVVAMDLKGKMLSSEEFGTFIKDAGVRGNSDIAFIIGGSLGISDEVLRRADHKLCISKMTFPHQLFRVILLEQ
IYRGFRIINGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 4e-43 56
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-42 55
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-42 55
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-42 55
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-42 55
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-42 55
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-42 55
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-42 55
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-42 55
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-42 55
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 6e-42 55
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-42 55
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-42 55
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-42 55
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-42 54
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-42 54
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 6e-41 53
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-39 52