Gene Information

Name : Clocel_4075 (Clocel_4075)
Accession : YP_003845501.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 4915998 - 4916465 bp
Length : 468 bp
Strand : -
Note : KEGG: cth:Cthe_0909 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II

DNA sequence : 
ATGTTTCTAGTTATTATGATAATAGCCTTAGTGGCTTTAGATCAAGTTTCAAAGCTTATGATCATCAATAATGTTGAGGT
TGGTGAAAAGATACCAGTTATAAATGATTTTTTCTATATAACTCATCACAAGAATGAAGGAATAGCGTGGAGTTTATTAG
AGAATAAAGGGTATATCTTTATTCCTATTACTATTATTGTAACAGTTGTTCTTTCGTATATGATATATAAGAACAAAGAA
AAGTTATTTAGAATCTCCTTAGCAGTAATTTTAAGTGGTGCTATAGGAAACTTGATTGATAGATTATTTTTAGGAAGTGT
TACAGATTTCTTTGAGTTTCATTTTGGCTCATATGTGTTCCCTGTTTTTAATGTGGCTGATATTTGTGTAGTTCTTGGAT
CTGTGGCATTGGTTATTTTTGTATTGTTTTTCTATGATGAAGAGCAAGATAAAATTAAGCTAAAATAG

Protein sequence : 
MFLVIMIIALVALDQVSKLMIINNVEVGEKIPVINDFFYITHHKNEGIAWSLLENKGYIFIPITIIVTVVLSYMIYKNKE
KLFRISLAVILSGAIGNLIDRLFLGSVTDFFEFHFGSYVFPVFNVADICVVLGSVALVIFVLFFYDEEQDKIKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-11 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 4e-10 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 4e-10 42
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 3e-10 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 3e-10 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 3e-10 42
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 8e-11 42
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_4075 YP_003845501.1 lipoprotein signal peptidase VFG2161 Protein 6e-20 42