Gene Information

Name : Clocel_3993 (Clocel_3993)
Accession : YP_003845420.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Unknown
Product : SNF2-related protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 4814546 - 4815916 bp
Length : 1371 bp
Strand : -
Note : KEGG: det:DET0071 SNF2 family helicase; PFAM: SNF2-related protein; SMART: DEAD-like helicase

DNA sequence :
ATGAGATTATGCTATAAGCCTCATGCGTACCAAGAGTATGCGATTGAGTTTATAAAGAAAAATCCCATAGCAGCAATCCT
GCTTGATATGGGTATGGGAAAGAGTAGTATTACCCTTACTGCCATCATGGAACTAATGTATGACAGCTTTGAGGTTTCCA
AGGTTCTCATTATTGCACCCCTTCGTGTAGCAAAGCATACATGGAGCGGAGAGATAGAGAAATGGGAGCATCTCAAAGGA
TTACGCTATTCCATAGTGGTTGGAACAGTAGCACAACGAAAGAAAGCATTACAGAAGGATGCAGATATTTACATCATCAA
CCGTGAAAATGTACCGTGGCTGATTGAACAAAGTGGACAGCCCTTTGACTATGACATGGTTGTAATTGATGAACTATCTT
CTTTTAAGAACTGGCAGTCCAAACGATTCCGTTCCCTTATGAAAGTAAGACCGATGGTTAAGAGAATGGTTGGTCTTACC
GGAACACCGTCATCCAATGGCATGATGGACTTGTTTGCAGAATATAAGGTGCTTGATATGGGAGCAAGACTTGGAAGATT
CATTGGTCAGTACCGACTGAATTACTTTAAGCCGGACAGGGTTAATGGACCTATTGTGTATTCCTACAAGCTGTTACCGG
GAGCCGAGCAGCAGATTTATGAGAAGATTGATGATATCACAATCTCCATGAAAGCTACCGACTACTTGGAAATGCCTAGT
CTTCTAAGTACGGAATATCCGGTATACCTTAGTGCAAGTGAACTGGATACATACGAAGAAATGAAAAAAGACCTTGTCTT
AAGTCTCCCCGGTGGAGAAATTACAGCATCCAATGCTGCATCACTTTCAGGAAAGCTGTCGCAGATGGCTAACGGTGCAG
TTTATACCGATGATAAAAGCTACATCGAATTCCATGATAAGAAGCTCGATGCTTTGGAAGATATTATCGAGGCAGCCAAT
GGTCAGCCACTTATGGTTGCTTATTGGTATAAGCACGACCTTATCCGAATTGAGGAAAGACTAAAATCCTTGGGAGTGCA
GTATCAGCGTTTGGATTCAGATGCATCCATCGAAAAATGGAACAGGGGAGAACTTCCTGTGGCACTTGTGCATCCGGCAT
CAGCAGGTCACGGCCTTAATCTTCAAAGTGGTGGTTCAACTCTTGTGTGGTTCGGAATCACATGGTCGTTGGAATTATAC
CAACAGACAAATGCCCGTCTGTATAGACAAGGTCAGACGGCAAGTTGTGTAAAAATCATCCACCTTATATCCAAGGGTAC
GATAGATGAACGAATCGTAAAAGCGTTGTCTGATAAGGACAATACACAGGCGGCTTTAATCGATGCGGTTAAAGCAGACC
TAAATCAATGA

Protein sequence :
MRLCYKPHAYQEYAIEFIKKNPIAAILLDMGMGKSSITLTAIMELMYDSFEVSKVLIIAPLRVAKHTWSGEIEKWEHLKG
LRYSIVVGTVAQRKKALQKDADIYIINRENVPWLIEQSGQPFDYDMVVIDELSSFKNWQSKRFRSLMKVRPMVKRMVGLT
GTPSSNGMMDLFAEYKVLDMGARLGRFIGQYRLNYFKPDRVNGPIVYSYKLLPGAEQQIYEKIDDITISMKATDYLEMPS
LLSTEYPVYLSASELDTYEEMKKDLVLSLPGGEITASNAASLSGKLSQMANGAVYTDDKSYIEFHDKKLDALEDIIEAAN
GQPLMVAYWYKHDLIRIEERLKSLGVQYQRLDSDASIEKWNRGELPVALVHPASAGHGLNLQSGGSTLVWFGITWSLELY
QQTNARLYRQGQTASCVKIIHLISKGTIDERIVKALSDKDNTQAALIDAVKADLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 7e-93 50
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 9e-96 50
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 5e-92 49
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 4e-97 49
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 1e-97 48