|
Name : Clocel_3780 (Clocel_3780) Accession : YP_003845214.1 Strain : Clostridium cellulovorans 743B Genome accession: NC_014393 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 4558403 - 4559929 bp Length : 1527 bp Strand : - Note : KEGG: cno:NT01CX_1046 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGTCAGAAAAGCAGTTCACAAACGATGAACAAAATGCTAACAATGAAGAAAATCATGAAGAGTTAAATAAGCTAATACT AGAAAGAATGCAAAAGCTTAAAGATGCACAAGAAGCTGGAGAAGATCCTTTTGATGTTTATAAGGTTGATAGAACTCACA CATCAAATGAAGTTAAAGAAAACTTTGAAGATCTTGAAGAGAAAGAAGTTGTGGTTGCAGGAAGATTAATGTCAAAAAGA GTTCATGGTAAAGCTGGATTCTGTGATATTCATGATAGATATGGCAAACTTCAATTACATGTAAAGATTGATAACATTGG AGAAGAAAAACTTAAAAAGTTTAAGACTTTAGATATTGGTGATTTTATATCAGTTACTGGTAAAGTGTTTAAAACTAAGA CTGGAGAAATAACAGTTTCAGTTACAGACTACCAACCTTTAACTAAGTCTTTACGTCCACTACCTGAAAAATATCATGGT TTAAAGGATACTGATTTAAGATATAGACAAAGATATGTAGATTTAATCATGAATCCAGAAGTTAAGGAAACCTTCATGAA GAGATCTGCTATTATTACTGCTATGAGAGAATATCTAGATCAACATGCTTATATTGAAGTAGAAACTCCTATTTTGTCAC CAATTGCTGGAGGGGCTGCTGCAAGACCATTTGTTACACATCATAATTCTTTAGATATAGATATGTATCTTAGAATTGCA ACAGAATTATATTTAAAGAGATTGATTGTTGGTGGTTTTGAAAAAGTATATGAGATTGGAAGAAACTTCAGAAATGAAGG TATTTCAGTAAGACACAATCCAGAATTCACAATGATTGAATTATATGAAGCTTATGCAGATTATAATGATATGATGGTGT TAACTGAAAATATGGTAGCATACATATGTAAAAAGGTTCTAGGAACTACAAAGGTTACTTATCAAGGAACTGAAATAGAT TTTACACCACCTTGGAGAAGAATTACCATGGTTGATGCAGTTAAAGAATATGCAGGTGTAGACTTTAATGAAATAAAAAC TGATGAAGAAGCTAGACAAATTGCAAAAGAAAAACATTTAGAACTTAAGAAAGAATTAAAATATTATACTAAGGGTGAAA TTTTAAATGAATTATATGAAGCTTTTGGTGAAGAACATATGATTCAGCCAACATTTATATATGATTACCCAGTAGAAATA TCACCTCTTACAAAGAAGAAGAGAGGAAATGAAGCATTTACTGAAAGATTTGAAGGCTTTGTTTTTGGAAGAGAACTTTG TAATGCATATTCAGAGCTTAATGATCCTATAGTTCAAAAAGAAAGATTTCTTCAACAATTGAAGGAAAGAGAACATGGTG ATGACGAAGCATACATGATGGATGATGATTTTATCACGGCTCTTGAAATAGGTATGCCACCAACAGGTGGAATGGGAATG GGTATAGATAGACTTGTTATGTTCCTAACAGATTCAGCATCTATAAGAGATGTACTTTTATTCCCAACAATGAAGCAAAT AAAATAA Protein sequence : MSEKQFTNDEQNANNEENHEELNKLILERMQKLKDAQEAGEDPFDVYKVDRTHTSNEVKENFEDLEEKEVVVAGRLMSKR VHGKAGFCDIHDRYGKLQLHVKIDNIGEEKLKKFKTLDIGDFISVTGKVFKTKTGEITVSVTDYQPLTKSLRPLPEKYHG LKDTDLRYRQRYVDLIMNPEVKETFMKRSAIITAMREYLDQHAYIEVETPILSPIAGGAAARPFVTHHNSLDIDMYLRIA TELYLKRLIVGGFEKVYEIGRNFRNEGISVRHNPEFTMIELYEAYADYNDMMVLTENMVAYICKKVLGTTKVTYQGTEID FTPPWRRITMVDAVKEYAGVDFNEIKTDEEARQIAKEKHLELKKELKYYTKGEILNELYEAFGEEHMIQPTFIYDYPVEI SPLTKKKRGNEAFTERFEGFVFGRELCNAYSELNDPIVQKERFLQQLKEREHGDDEAYMMDDDFITALEIGMPPTGGMGM GIDRLVMFLTDSASIRDVLLFPTMKQIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-101 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocel_3780 | YP_003845214.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-101 | 48 |
