Gene Information

Name : Clocel_3464 (Clocel_3464)
Accession : YP_003844906.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4239152 - 4239832 bp
Length : 681 bp
Strand : -
Note : KEGG: cpf:CPF_1792 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
TTGAGTAAGCTTATAGAATTAAAAGACATTAATAAGTTCTATAGGTTAAGAAGTGATAAGCTGCATGTTTTAAAAGGTAT
CAATCTAACTATAGAACAAGGTGACTTTGTTATGATAATGGGCAAATCTGGAAGTGGGAAAACTACACTTTTGAATTTAC
TTGGGTTATTAGACAATTTTGATAATGGAAACTTTATTTTTGATGGTAAGGATGTAACTCATTTTAATGAAAACCAGAGA
TCACAGCTCAGAAATAAGCATATGGGGTTTATATTTCAACAGTTTCATCTTATAGAGTCTCTAACTATAGCACAAAATGT
AGAGTTGCCATTAGTATACAGAGGCAAGGTTCCAAAAAGGAAAAGAATCGATGATACAAATAAATATCTAGAGATGGTAG
GACTTCTTGAAAAGAAAAATGTTAAACCTACTGAATTATCAGGAGGCCAGCAGCAAAGGATAGCAATTGCAAGAGCACTT
ATTAATGATCCTTATGTTATCTTCGCTGACGAGCCAACAGGAGCACTAGATAGTGTAACTAGCACGCAGATAATGGAGAT
ATTAAAGAAACTTAATGAAGATAATAAAACAATTATAATGGTAACTCATGATGAGGAGTTAGCTTCATATGCAAATAAAG
TAATTCATATAAAAGATGGATTAGTGGTGAAGGTGGAATAA

Protein sequence : 
MSKLIELKDINKFYRLRSDKLHVLKGINLTIEQGDFVMIMGKSGSGKTTLLNLLGLLDNFDNGNFIFDGKDVTHFNENQR
SQLRNKHMGFIFQQFHLIESLTIAQNVELPLVYRGKVPKRKRIDDTNKYLEMVGLLEKKNVKPTELSGGQQQRIAIARAL
INDPYVIFADEPTGALDSVTSTQIMEILKKLNEDNKTIIMVTHDEELASYANKVIHIKDGLVVKVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_3464 YP_003844906.1 ABC transporter NC_012469.1.7686878. Protein 1e-48 51
Clocel_3464 YP_003844906.1 ABC transporter NC_008702.1.4606598. Protein 4e-37 44
Clocel_3464 YP_003844906.1 ABC transporter NC_012469.1.7686946. Protein 2e-21 41