Gene Information

Name : Clocel_3452 (Clocel_3452)
Accession : YP_003844894.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4222480 - 4223142 bp
Length : 663 bp
Strand : +
Note : KEGG: tit:Thit_0218 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATTGATATTAAAAATGTTTCTAAATCCTATACAATGGGGTCAAATATAGTTAAAGCACTAGATGATATAAGCTTTCA
TGTTGATGAAGGTGAGTTCGTATCCATCATAGGTCCTTCTGGTTCTGGTAAATCCACTTTAATGAATATTCTTGGATGCC
TTGATGTTCCAGACAGCGGCACTTATACTTTTAATGGTTTAAATGTAGAAAAAGCTAGAGATTCTAGTTTAGCAGAAATA
AGAAATAAACAGGTTGGCTTTGTATTTCAGAACTTTAATCTGTTAGCTAAATTAAATGCTTTAGAAAATGTAGAAGTCCC
CCTTTTATACCGTGGCTTAAATAGTAAAGAATGTAGGAAAACCGCTTTAAAATATTTAGATTTAGTAGGCTTAAAAGATC
GTGAACATCATAAACCTAGTGAATTATCTGGTGGGCAACAACAAAGAGTAGCTATAGCAAGAGCTCTTGCTGGTTCTCCA
AATATTATTCTAGCCGATGAACCTACTGGTGCTTTAGACTCCAAAACTAGCAACGATATTATGGCACTAATTAAAGATTT
AAATAGAAATGGACAAACTATTATTTTAATCACTCATGATAAAACTGTAGCAGAACAAGCTAAGAGGGTTGTACGAATAG
AAGACGGGAAGCTTTATGAATAA

Protein sequence :
MIDIKNVSKSYTMGSNIVKALDDISFHVDEGEFVSIIGPSGSGKSTLMNILGCLDVPDSGTYTFNGLNVEKARDSSLAEI
RNKQVGFVFQNFNLLAKLNALENVEVPLLYRGLNSKECRKTALKYLDLVGLKDREHHKPSELSGGQQQRVAIARALAGSP
NIILADEPTGALDSKTSNDIMALIKDLNRNGQTIILITHDKTVAEQAKRVVRIEDGKLYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-34 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_3452 YP_003844894.1 ABC transporter NC_012469.1.7686878. Protein 1e-56 58
Clocel_3452 YP_003844894.1 ABC transporter CP001581.1.gene798.p Protein 4e-47 48
Clocel_3452 YP_003844894.1 ABC transporter CP001581.1.gene598.p Protein 3e-43 46
Clocel_3452 YP_003844894.1 ABC transporter NC_008702.1.4606598. Protein 8e-43 45
Clocel_3452 YP_003844894.1 ABC transporter NC_012469.1.7686946. Protein 4e-31 41