Gene Information

Name : Clocel_3032 (Clocel_3032)
Accession : YP_003844486.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 3722492 - 3724651 bp
Length : 2160 bp
Strand : -
Note : KEGG: cbb:CLD_0604 RNA-binding protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold

DNA sequence :
ATGATAGTTGAAGCTCTAAGTTCAGAGTTGAATTTAAAAAAAGAGATTGTAGAAAATGTTATAGAGATGCTTAATGAAGG
TGCTACTGTACCGTTTATAGCTAGATATAGAAAGGAAAGAACAGGCGGCTTATCCGATGAAGTTCTAAGAAATTTCTATG
AGAGATTAATATATTTAACAAATTTGCAGGAAAGAAAAGCAGCTGTAATAAAGTCTATAGAAGAGCAAGGAAAGCTTACT
TTGGAACTAAAAGAAGCTATAGATAATGCAAAAACACAAGCAGAAGTTGAGGATTTATATAGACCATATAAACAAAAAAA
GAGAACAAGGGCAACAATAGCTGTAGAGAAAGGTTTAGAATCTTTGGCAGATATTCTTTATAGTGGTGATTTTAAAGCTG
ATGTAAGATTAAAGGCAGCAGAGTTTATAAATGAAGAAAAAGGTGTTAATAGTGAAGAAGAAGCCATTCAAGGGGCTTTA
GATATCATTGCCGAAAAAATTTCTGATAACGCTGAGCATAGAAAGTGGATTCGTGATTTTGTTTATAAAAATGGTATAGT
AGAAACTACTGGAGATAGTGACGAGCCAACAACCTATGAGATGTACTATGATTATAAAGAAGAAGTTAAGAAGATGCCAC
CTCATAGAATTTTGGCGATAAATAGAGGTGAAAAGGATAAGGTTATTTCTATAAAGGTTGTATCTGATGAAGAGAAAATA
ATAACTTATTTAAATAATAGAGAGCTTAAGAATAATACTGTTACAGATGGCTATGTAATGGAAGCTATAAGAGATAGTTT
AAAAAGACTTATATATCCGTCTATTGAAAGAGAAATAAGAAGTACTTTAACTGAAAAAGGTGAAGAGGGAGCTATAAAAA
TATTTAAGGAAAATCTTAAAGCTCTTTTGATGCAAGCACCTATAAAAGGAAAGACTGTTTTAGGTTTTGACCCAGGTTTT
AGAACAGGATGTAAAATAGCTGTTTTAGATGAAACAGGAAAGATTTTGGATACTCATACGGCTTATGTTACTAGTAAAGG
TAAAGAAGGGCTGCAAGAAGAAAAGGCTAAACTAAAAGAATTAATTCTTAAGCATGATGTGGATGTTATTTCACTTGGAA
ATGGAACTGCTAGTAGGGAATCAGAAGAAATTATTGCTGAGTTGCTAAAAGAAGTAAAAAATGAAATAGGAAAAGAGATT
TACTATGTTATTGTTAACGAAGCAGGAGCTTCTGTTTATTCAGCATCTGAATTAGCATCAAAGGAATATCCAGATATAAA
TGTATCTATAAGAGGAGCTATATCTATAGGAAGAAGAATGCAAGATCCAATGGCTGAACTAGTAAAGATAGATCCAAAAT
CAATAGGGGTAGGACAGTATCAGCATGATGTAACCCCGAAAAAGTTAGATGAATCTTTAAAAGGTGTTGTTGAGGATTCT
GTTAACAATGTGGGTGTAGATCTAAACACTGCGACTCCATCACTTTTAAGTTATGTTTCTGGAATTAATTCAACTATAGC
ACAAAATATTGTAGACTATAGAAATGAAAATGGTAAGTTTTCAAGTAGAAAGGAAATTTTAAAGGTTAAAAGGCTAGGAC
CTAAGGCTTATGAGCAATGTGCAGGTTTTTTAAGAGTTCCAGAGAGTAAAGAACTTTTAGATAATACTTCTGTACATCCA
GAATCATATGATGCTACGAAAAAGCTTTTAGAACTTTTGGGATATACTATAGATCAGGTGAATGAGAGAAGGATTCAAGA
TATAGATTCAAAAGTCAAAGAAAAGACAATAGAAAAGTTAAGTGAAGGTCTTGGCATTGGAGTTCCTACTTTATTGGATA
TAATAAAAGAACTTAAAAAGCCAGGAAGAGATCCAAGAGAAGATATGCCAAAGCCAATATTAAAGTCTGGAGTAATTGAA
CTTTCAGATTTAAAACCAGGTATGGTTTTAAAGGGTACTGTAAGAAATGTTGCAGATTTTGGTGCCTTTGTAGATATAGG
AGTTCATCAAGATGGGTTAGTACATAAGAGTGAAATGAGAAATTCTTTTGTTAAGCATCCTTTAGATGTGGTTAAGGTAG
GAGATATTATCGATGTTAAAATTCTAGAGGTTGATGAAAAGAGAAGAAGAATTGCTCTTTCAATGAAGTTTGGAGAATAA

Protein sequence :
MIVEALSSELNLKKEIVENVIEMLNEGATVPFIARYRKERTGGLSDEVLRNFYERLIYLTNLQERKAAVIKSIEEQGKLT
LELKEAIDNAKTQAEVEDLYRPYKQKKRTRATIAVEKGLESLADILYSGDFKADVRLKAAEFINEEKGVNSEEEAIQGAL
DIIAEKISDNAEHRKWIRDFVYKNGIVETTGDSDEPTTYEMYYDYKEEVKKMPPHRILAINRGEKDKVISIKVVSDEEKI
ITYLNNRELKNNTVTDGYVMEAIRDSLKRLIYPSIEREIRSTLTEKGEEGAIKIFKENLKALLMQAPIKGKTVLGFDPGF
RTGCKIAVLDETGKILDTHTAYVTSKGKEGLQEEKAKLKELILKHDVDVISLGNGTASRESEEIIAELLKEVKNEIGKEI
YYVIVNEAGASVYSASELASKEYPDINVSIRGAISIGRRMQDPMAELVKIDPKSIGVGQYQHDVTPKKLDESLKGVVEDS
VNNVGVDLNTATPSLLSYVSGINSTIAQNIVDYRNENGKFSSRKEILKVKRLGPKAYEQCAGFLRVPESKELLDNTSVHP
ESYDATKKLLELLGYTIDQVNERRIQDIDSKVKEKTIEKLSEGLGIGVPTLLDIIKELKKPGRDPREDMPKPILKSGVIE
LSDLKPGMVLKGTVRNVADFGAFVDIGVHQDGLVHKSEMRNSFVKHPLDVVKVGDIIDVKILEVDEKRRRIALSMKFGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-142 47