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Name : Clocel_2730 (Clocel_2730) Accession : YP_003844191.1 Strain : Clostridium cellulovorans 743B Genome accession: NC_014393 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 3340474 - 3343062 bp Length : 2589 bp Strand : - Note : TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: cac:CAC1098 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix dom DNA sequence : GTGGGAAAATTAGTTATTTTAGATGGTCATAGTCTCATGAATAGAGCATTTTATGCAATACCACCCCTAACGACTGCAGA AGGACTTCACACTAATGCTATTTTTGGTTTTATAAATATGCTTTTTAAGATCAGGGAAGATATAAAACCTGATTATATAG TAACAACTTTTGATAGAAAGGCGCCGACATTTAGGCATGAAGAGTATCAGGATTATAAAGCTGGACGAAAAAGGATGCCT GATGAACTTCATGAGCAATTTGAGCCTTTAAAAGATATTTTATCAAAAATGGCTATCAATATTTTTGAAATCGATGGTTT TGAAGCTGATGATTTAATTGGAACTTTAGCTGTAAAGGCTGAGAGTGAAGGTATAGAAGTATACATAGTAACAGGAGATA GGGACGCACTTCAGCTTGCTTCAGATAACATAAAAGTATTACTTACGAAAAAAGGCGTATCTGAAAGGGAAGTTTACGAT AGAAACCGTATGATAGAGGATTATGGTGTTACACCAACCCAGTTTATTGATGTAAAAGGATTAATGGGGGATGCTTCTGA TAATATTCCGGGAGTTCCTGGCATAGGTGAAAAAACAGCGTATAAGTTAATAAAGGAATATGGATCTATAGAAGGAGTTT TAGATAATTTAGATAAACTAAAAGGAAAGATAAAAGAAAATCTAGAAAGTCATTGTGAGGATGCGATATTTAGTAAAAAG CTAGCGACAATAATTACGAATGTACCAATAGATATAGATTTAGATGATATAAAATCTCAAGAAGCCTATGATGTGAAGGC ACTTAGAGAATTGTTTTTTAAGTATCAATTTAAAAGTCTTATAAATAAGTTGCCAGAAGAAGAAAATCAAGGACAAAAGC CAGCTGTGGAAGTAGTTATAGAAAAAATAAGTACATTAGTTGACTTTGAAAAACTTACAGAAAACGTAGATACTGAGCTT TTCATAGTACATGAAATATCAGGAAAAGAAAAGTTTTCGCTTATGAAATTAGAAAAGCTATATATACATAATTCAAAATC CTATGAAATAGAAGTACAAAAACTTTTTGAAGAGAACGAAGAAAAATCTAAAGAATATCTAAAAAAGTTATTTGAAAATA CTTCTGAGAAGATTATTCATAATGCAAAAAACCTATTTACAGTCTTAAGTAAGTTGGATATAGATATAAATAATTTTGTT TTTGATACAGAAATCGCTGCTTATTTAATAGAATCCAGTGATAAAGAGTATACGCTAAAAACTCTTTTTGAAACTTATTT GCATGAAACATATCAAGATATTTCTCAAGAAATATCAAATCTTAGCAATTTATATCAAAGATTAAAGGAAAAAATCAAAG AACTTCAAATGGAGGACCTTTTATATAAAATAGAGTTGCCATTAGTGAAGGTTCTAGCAGATATGGAGAAAGTAGGCTTT AAAGTTGACAGAGAGCAACTCGACCAATTAAGAGAAAAGTTTATCAATGAAATTACTGTATCTCAAAAGGAAATATATGA AATGGCTGGAGAAGAGTTCAACATAAGTTCTCCAAAGCAACTAGGTAAGATACTTTTTGAAAAGTTAGATTTACCTGTAA TCAAAAAGACAAAGACAGGTTATTCTACTAATGCAGAAGTACTTGAAAAGCTTAAGGATAAGCATCCTATAATAGATAAA ATTACATACTATAGACAGTTGACTAAACTTAATTCTACCTATGTTGAAGGGCTTATTCATGTAATTGATCAAGATGGAAG GATACATTCTAGTTTTAATCAAACAGTTACAACTACTGGTAGATTATCAAGTACAGAACCGAATCTTCAGAATATACCTA TAAAATATGAGATGGGTAGAGCTATTAGAAAGGTTTTTGTTCCTAATGATGAAGAGAGTTTAATATTATCAGCAGACTAT TCTCAAATTGAATTAAGAGTATTAGCGCATATGGCTGATGATGAAAATATGAAAACTGCATATTTAGAGCATATAGATAT TCATACAAAAACTGCTTCTGAAGTTTTTAACCTTCCTTTAGACCAAGTTACTAAAGAAAAAAGAAGTGCAGCAAAAGCAG TTAACTTTGGAATAGTTTATGGTATAAGTGATTTTGCATTAAGCGAAGATTTAAAAATATCCAAAAAGGAAGCAAAACAA TATATAGATACTTATTTTAGTAGATATCCTAAAGTTAAAGAATATATCAGTAGTACAATAGCTAAAGCTGAAAAAGAGCT GTATGTAAATACGATTTTTAATAGAAGAAGATTTATACCTGAAATAACATCCTCAAATAAGATTGTTAAAGCATTAGGAG ACAGATTGGCAATGAATGCTCCAATTCAAGGAAGTGCTGCAGATATAATAAAATTAGCTATGGTAAATGTCTCCAAAAGG TTAAAAGAAGAAAAATTAAAATCTTCATTAATACTTCAAGTGCACGACGAAATAATTCTAAATGTCTATAAGGATGAACT TGAAACAGTAAAAGAACTTGTTAAAAAAGAGATGGAATCAGTTATTGATTTTTCTGTTCCTTTAGAGGTAGATATAAACA CAGGAACTACTTGGTATGATGCGAAATAA Protein sequence : MGKLVILDGHSLMNRAFYAIPPLTTAEGLHTNAIFGFINMLFKIREDIKPDYIVTTFDRKAPTFRHEEYQDYKAGRKRMP DELHEQFEPLKDILSKMAINIFEIDGFEADDLIGTLAVKAESEGIEVYIVTGDRDALQLASDNIKVLLTKKGVSEREVYD RNRMIEDYGVTPTQFIDVKGLMGDASDNIPGVPGIGEKTAYKLIKEYGSIEGVLDNLDKLKGKIKENLESHCEDAIFSKK LATIITNVPIDIDLDDIKSQEAYDVKALRELFFKYQFKSLINKLPEEENQGQKPAVEVVIEKISTLVDFEKLTENVDTEL FIVHEISGKEKFSLMKLEKLYIHNSKSYEIEVQKLFEENEEKSKEYLKKLFENTSEKIIHNAKNLFTVLSKLDIDINNFV FDTEIAAYLIESSDKEYTLKTLFETYLHETYQDISQEISNLSNLYQRLKEKIKELQMEDLLYKIELPLVKVLADMEKVGF KVDREQLDQLREKFINEITVSQKEIYEMAGEEFNISSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKLKDKHPIIDK ITYYRQLTKLNSTYVEGLIHVIDQDGRIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGRAIRKVFVPNDEESLILSADY SQIELRVLAHMADDENMKTAYLEHIDIHTKTASEVFNLPLDQVTKEKRSAAKAVNFGIVYGISDFALSEDLKISKKEAKQ YIDTYFSRYPKVKEYISSTIAKAEKELYVNTIFNRRRFIPEITSSNKIVKALGDRLAMNAPIQGSAADIIKLAMVNVSKR LKEEKLKSSLILQVHDEIILNVYKDELETVKELVKKEMESVIDFSVPLEVDINTGTTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-148 | 44 |
