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Name : Clocel_2353 (Clocel_2353) Accession : YP_003843833.1 Strain : Clostridium cellulovorans 743B Genome accession: NC_014393 Putative virulence/resistance : Unknown Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2772811 - 2774625 bp Length : 1815 bp Strand : - Note : KEGG: sne:SPN23F_12790 putative group II intron reverse transcriptase/maturase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); intron maturase type II; SMART: HNH nuclease DNA sequence : ATGAGAAATCCTCAAAACATGTTAATAAGTCTAACAAAACACAGTAATAATAAGAATTATAAGTATGAACGATTATATCG CTTACTTTATAATGAGGAAATGTATTTAACTGCTTATCAAAGAATCTATACAAATGAAGGAAACATGACAAAAGGCACAG ACAATCAAACAATTGATGGTATGAGCTTGAAAAGAATAACTAATATAATAAATTCGCTAAGAAATGAAAGTTATCAACCT AAACCATCTCGCAGGACATATATTCCTAAGAAAAATGGGAAATTACGTCCTCTTGGAATACCTTCTTTTGAAGATAAATT GCTACAAGAAGTCATTAGAATGATACTTGAGTCAATTTACGAAGGATATTTTGAAGAAACTTCACACGGTTTCAGACCAA ACAAAAGTTGTCATACTGCACTTTCTAAAATACAAGCAACTTTTACTGGTGTAAAATGGTTTATTGAAGGCGATATTAAA AGCTTTTTTGATAACATTAATCATGATAAAATGATTAACATTTTAAGCGAAAGAATAAATGATCAAAGATTTATGAGGCT AATACGGAAGTTTTTAAATGCAGGATATATGGAAGAATGGACTTTTCATAAGACATTTTCTGGTTGCCCTCAAGGCGGAA TCATAAGTCCAATACTTGCAAATATCTATTTAGATAAATTTGATAAGTACATGAAAGAATATGTTAAATTATTTAGAAAT GGTAAACGAAGAGAAGTAACCTTAGAATACCGTCAAAATAAAGATGCTCTTAGACTTGCCAGGGTAGAATTTAGTAAAGC TGTTAATGAAACCGAAAAATATAAAGCAATAACAAAAATAAGAGAGTTGGAAAAAGCAAGAGTTTTTATACCATATGGAA ATCCTATGGATACGGAATATAAAAGGTTAATATATATCCGTTACGCAGATGATTGGTTATGCGGCGTAATTGGTAGTAAG GAAGAATGTAGAAAAATCAAAGAAGATATTAAAACTTTCTTAGCTGAAAAACTACAACTTGAACTATCAGAAGAAAAAAC GCTAATTACTAATGCAAAAGATAAAGCAAATTTTCTAAGTTATAAAATATATGTTAGAAAAAGCAATCTAAGTAAACGTG ATAAGGCTGGCAGATTAGTTAGGAATTATACTGGTAGGGTGGTCTTAGAGGTATCAACAGATATAATAAAAAAGCGTTTG ATTGATTATAGTGCCATGAAATTAACTTATCACCAAGATAAGGAAGTTTGGAAACCTACTGCACGATATAATATGAAAGA TTGTGATGATTTAGAAATTTTAGATAGATATAATTCTGAAATTCGAGGATTTTATAATTATTATTGCATTGCCAATAACA GTTCAATTATTAACAGTTTCAAATATATTATGGAGTATAGTATGTATAAAACCTATGCAACAAAATATAGAACTACAAAA GCAGATATTATAGAAAAGTTTAGAATTAATAAAGACTTTGGAATTAGATATAAAAATTCAAAAGGTATTGAAAGAGTAAG ACTTTTTTATAATGAAGGGTTTAAGAGACAAAAGGAATGTCTAAGGAAAAATGCTGATTTAATACCAGATGGTATTAAAT ATTTTAGCAGCACAAGTCTAATTGAAAGGTTAAGAGCAAATAAATGTGAAATATGTGGCAAAGAAAATGCCACAATAGAA ATACATCACATAAGGAAATTAAAGGACTTACAAGGAAAAAATTTCTGGGAAACTCTTATGATAGCAAGGAGACGAAAAAC ATTGGCACTGTGTTTAGAATGTCATAAAAAATTACATTGTGGCAAGTTAGATTAA Protein sequence : MRNPQNMLISLTKHSNNKNYKYERLYRLLYNEEMYLTAYQRIYTNEGNMTKGTDNQTIDGMSLKRITNIINSLRNESYQP KPSRRTYIPKKNGKLRPLGIPSFEDKLLQEVIRMILESIYEGYFEETSHGFRPNKSCHTALSKIQATFTGVKWFIEGDIK SFFDNINHDKMINILSERINDQRFMRLIRKFLNAGYMEEWTFHKTFSGCPQGGIISPILANIYLDKFDKYMKEYVKLFRN GKRREVTLEYRQNKDALRLARVEFSKAVNETEKYKAITKIRELEKARVFIPYGNPMDTEYKRLIYIRYADDWLCGVIGSK EECRKIKEDIKTFLAEKLQLELSEEKTLITNAKDKANFLSYKIYVRKSNLSKRDKAGRLVRNYTGRVVLEVSTDIIKKRL IDYSAMKLTYHQDKEVWKPTARYNMKDCDDLEILDRYNSEIRGFYNYYCIANNSSIINSFKYIMEYSMYKTYATKYRTTK ADIIEKFRINKDFGIRYKNSKGIERVRLFYNEGFKRQKECLRKNADLIPDGIKYFSSTSLIERLRANKCEICGKENATIE IHHIRKLKDLQGKNFWETLMIARRRKTLALCLECHKKLHCGKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 7e-116 | 45 |
