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Name : Clocel_1852 (Clocel_1852) Accession : YP_003843360.1 Strain : Clostridium cellulovorans 743B Genome accession: NC_014393 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2234326 - 2235030 bp Length : 705 bp Strand : + Note : KEGG: cac:CAC1700 response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein DNA sequence : ATGGCTAAAGAAAAGATACTTATTGTTGATGATGAAGAACATATTGTTGAATTAATAAAATATAACTTAGAAGCTGAGGA GTATAAAGTTTTAACTGCTCATGATGGAATTGAAGCTGGAAAAATAGCTAAAAAAGAAAAACCATCACTTATTCTCTTGG ACTTAATGCTTCCAGGTATAAGTGGAATGGAAGTATGCAAAAAAATAAGAAGGGATGATGAAATTTCAGAAATTCCTATA ATTATGCTTACAGCTAAGAGTGATGAACTTGATAAAATTCTAGGACTTGAGCTTGGAGCAGATGATTATATTACTAAGCC ATTCTCAATTAGAGAACTGTTAGCAAGAGTTAAAGCTGTTCTAAGAAGAACTAATACAGTAGCAGTTTCAACTAATTCTA GATTTGGAGAGTTAACTATAGATTTTAGTAAATATGAAGTGAGAAAAAATGATATTAAAGTAGATTTAACCTTAAAAGAA TTTGAACTACTAAATATTCTAGTTAAGAATAGAGGAAAAGTTTTGACTAGGGATGTATTACTAGATAAAATTTGGGGTTA TGAGTATATTGGAGAAACTAGAACAGTGGATGTTCACATAAGGCACCTAAGGAAAAAAATTGAGGATGATGATAGTAGTC CAAAATATATAGAAACTATCAGGGGAATTGGATACAGGTTTAGTTACGATGAGGAAACTGTATGA Protein sequence : MAKEKILIVDDEEHIVELIKYNLEAEEYKVLTAHDGIEAGKIAKKEKPSLILLDLMLPGISGMEVCKKIRRDDEISEIPI IMLTAKSDELDKILGLELGADDYITKPFSIRELLARVKAVLRRTNTVAVSTNSRFGELTIDFSKYEVRKNDIKVDLTLKE FELLNILVKNRGKVLTRDVLLDKIWGYEYIGETRTVDVHIRHLRKKIEDDDSSPKYIETIRGIGYRFSYDEETV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanRB | YP_001698483.1 | regulatory protein | Not tested | Not named | Protein | 6e-34 | 43 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 8e-32 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-31 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-31 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-31 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-31 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-32 | 42 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 6e-42 | 42 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 6e-31 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 1e-41 | 41 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 6e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene2815. | Protein | 1e-54 | 56 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7685629. | Protein | 9e-52 | 52 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7686381. | Protein | 5e-50 | 51 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002952.2859905.p0 | Protein | 1e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_007793.3914279.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002745.1124361.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_009782.5559369.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002951.3237708.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_007622.3794472.p0 | Protein | 1e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002758.1121668.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_003923.1003749.p0 | Protein | 1e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_009641.5332272.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_013450.8614421.p0 | Protein | 2e-52 | 50 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | AE016830.1.gene1681. | Protein | 2e-49 | 47 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_005054.2598277.p0 | Protein | 1e-40 | 45 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_014475.1.orf0.gen | Protein | 1e-40 | 45 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002951.3238224.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_007793.3914065.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002758.1121390.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_010079.5776364.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002952.2859858.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_007622.3794948.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_003923.1003417.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_013450.8614146.p0 | Protein | 2e-38 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene1528. | Protein | 5e-37 | 44 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | AE015929.1.gene1106. | Protein | 3e-33 | 43 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | AE000516.2.gene3505. | Protein | 5e-41 | 43 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | CP004022.1.gene1676. | Protein | 9e-36 | 43 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | DQ212986.1.gene4.p01 | Protein | 9e-37 | 42 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | BAC0596 | Protein | 2e-37 | 42 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | CP001138.1.gene2239. | Protein | 2e-37 | 42 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene1202. | Protein | 2e-35 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | AF155139.2.orf0.gene | Protein | 5e-39 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | BAC0039 | Protein | 5e-38 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | CP000034.1.gene2186. | Protein | 5e-38 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | NC_002695.1.916589.p | Protein | 4e-38 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | CP001918.1.gene3444. | Protein | 5e-37 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | CP000647.1.gene2531. | Protein | 5e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | VFG1563 | Protein | 3e-42 | 42 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | VFG0596 | Protein | 2e-31 | 41 |
| Clocel_1852 | YP_003843360.1 | two component transcriptional regulator, winged helix family | VFG1702 | Protein | 4e-42 | 41 |
