Gene Information

Name : Clocel_0013 (Clocel_0013)
Accession : YP_003841568.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 21223 - 22503 bp
Length : 1281 bp
Strand : +
Note : TIGRFAM: seryl-tRNA synthetase; KEGG: cbl:CLK_3156 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like

DNA sequence :
ATGTTAGATCTTAAAAGAATAAGAAGCAATAAAGATGAGATTAAAGCAGCTTTAAGCAACAGAGGTGAAGATTTTGATCT
TACTGTTATAGATAAGGTAGTTGAGCTTGATGAGTCAAGAAGAGCAATCTTAGTAGAAGTAGAAAACAAAAAGAACCAAA
GAAATACAGAATCAGCATTAGTACCAAAGCTAAAAAAAGCTGGCGAAGATGCTTCTGAAGTGCTTCAAAGAATGAAATCT
CTATCAGACGAAATTAAGGAATTAGATGACAAAGTTAGAGCAATAGATGAAGAAATAGAGTACATAATGCTTAGAATTCC
AAACATACCTAATCCATTAGTTCCAGATGGGGCAACAGATGAGGATAATCTTGAAATTAAAAGATGGGGAGAACCAAGAA
AATTTGAAAATGAGCCAAAAGCGCATTGGGATCTAGGTGTGGATCTAAAAATATTAGATTTTGAAAGAGCTGGGAAGGTT
ACTGGTTCAAGATTTACTTTTTATAGAGGTCTTGGTGCTAGATTAGAAAGAGCACTAATCAGCTATTTCTTAGATACACA
TGTTGATATAAATGGGTATACAGAAATTATGCCTCCATTAATGGCTAATAGAAATAGTATGAAAGGTACAGGACAACTTC
CTAAGTTTGAAGAAGATGCTTTTACAATACAAAATAACGGATACTTCTTAATTCCTACAGCAGAGGTACCTGTAACTAAT
TATTATAGAGATGAAATTTTAGTTGGTGAAGAATTACCTATAAAGCATGTAGCTTATTCAGCTTGTTTTAGATCTGAGGC
TGGTTCAGCTGGAAGAGATACTAGAGGACTTGTAAGACAGCATCAATTTAATAAAGTTGAACTTGTTAAGTTTACAAAAC
AAGAACAAAGTTATGAAGAATTAGATAAACTAGTTAAAGACGCAGAAAGTATACTAGAAGGACTTGGATTACCATATAGA
AAGGTAAGAATATGCAAGGGTGATTTAGGATTTACAGCGGCTTTAAAATATGATTTGGAAGTATGGATGCCAAGTTATAA
TAAATATGTAGAGATATCAAGTTGTTCAAATTTTGAAGATTTCCAAGCTAGAAGAGCAAACATAAAATATAGAGAAGATG
CAAAAGCTAAACCACAATTTGTTCACACATTAAATGGATCTGGTCTTGCAGTAGGAAGAACTTTTGCTGCTATTCTTGAA
AATTATCAAAATGAAGATGGCAGTGTAACAATTCCAGAAGTTTTAAGAAAATACATGGGTGGAGTAGAAGTTATAAAATA
G

Protein sequence :
MLDLKRIRSNKDEIKAALSNRGEDFDLTVIDKVVELDESRRAILVEVENKKNQRNTESALVPKLKKAGEDASEVLQRMKS
LSDEIKELDDKVRAIDEEIEYIMLRIPNIPNPLVPDGATDEDNLEIKRWGEPRKFENEPKAHWDLGVDLKILDFERAGKV
TGSRFTFYRGLGARLERALISYFLDTHVDINGYTEIMPPLMANRNSMKGTGQLPKFEEDAFTIQNNGYFLIPTAEVPVTN
YYRDEILVGEELPIKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKQEQSYEELDKLVKDAESILEGLGLPYR
KVRICKGDLGFTAALKYDLEVWMPSYNKYVEISSCSNFEDFQARRANIKYREDAKAKPQFVHTLNGSGLAVGRTFAAILE
NYQNEDGSVTIPEVLRKYMGGVEVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 7e-121 60