Gene Information

Name : Clocel_1169 (Clocel_1169)
Accession : YP_003842689.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1411887 - 1412570 bp
Length : 684 bp
Strand : +
Note : KEGG: ctc:CTC01419 transporter; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAAATTTTAAAGACTAAAGATTTGTGTAAGAGCTATGGTAGTGGTGATCTAAAAGTAGAGGCCCTTAAAAATATTAA
TATTTCAGTTAATCAAGGTGAGTTTGTTGCAATAGTTGGAGCAAGTGGTTCGGGAAAGAGTACTTTGCTTCATCTCCTTG
GAGGTATCGATAAACCTACCAGTGGAAGTGTAATTGTTGATGGTTCTGATATATATACCTTAGGTGAGAAGGAACTTGCT
GTTTTTAGAAGACGTAAGGTTGGGTTTATATTTCAATCCTATAATCTGATTCCAGTATTAACTGCAGAGGAAAATATGGT
AATGCCTTTGCTTTTAGACAATAGAACTGCAGATGAAAAGTATTTTGAGGAGCTACTTACTATTTTAGGCCTTCAGGATA
GAAGAAATCATCTTCCGTCAGAATTATCTGGAGGACAACAACAAAGAGTTTCTATAGGAAGGGCTATGGTTTATAAGCCT
TCAATAATTCTTGCCGATGAGCCTACAGGAAACTTAGACAGCAAAAATAGCAAGGAAATAATAGAGCTTCTTCAGTACTC
TGTTAAAAAGTATCATCAAACCTTGATTGTAATAACACACGATTTAAAAATAGCGGCTGTAGCAGATAGGGTAATAACAA
TTGATGATGGCTGTGTTGTGAAAAATGAGGTGATGAGAGGATGA

Protein sequence : 
MEILKTKDLCKSYGSGDLKVEALKNINISVNQGEFVAIVGASGSGKSTLLHLLGGIDKPTSGSVIVDGSDIYTLGEKELA
VFRRRKVGFIFQSYNLIPVLTAEENMVMPLLLDNRTADEKYFEELLTILGLQDRRNHLPSELSGGQQQRVSIGRAMVYKP
SIILADEPTGNLDSKNSKEIIELLQYSVKKYHQTLIVITHDLKIAAVADRVITIDDGCVVKNEVMRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-38 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_1169 YP_003842689.1 ABC transporter CP001581.1.gene798.p Protein 1e-65 59
Clocel_1169 YP_003842689.1 ABC transporter CP001581.1.gene598.p Protein 3e-57 53
Clocel_1169 YP_003842689.1 ABC transporter NC_012469.1.7686878. Protein 3e-42 48
Clocel_1169 YP_003842689.1 ABC transporter NC_008702.1.4606598. Protein 2e-37 45
Clocel_1169 YP_003842689.1 ABC transporter NC_012469.1.7685735. Protein 2e-35 43