Gene Information

Name : Clocel_1122 (Clocel_1122)
Accession : YP_003842644.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1356463 - 1357218 bp
Length : 756 bp
Strand : +
Note : KEGG: ckr:CKR_3126 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAAGGTCTTAGAGAGTAAGAAAGTAACTAAAGTATATGATGCATTTAAAGGTGCCCAAGCAATAAAGGCACTTAATGA
TATATCTTTCAAGGTGGAGGAGAAGGAATTTTTAGGGGTAATGGGTCCAAGCGGAAGTGGTAAGACTACCCTTTTAAATA
TTCTAGCTGGCATTGATAAAGCTACTTCTGGGGAAATTTTTATAGATGGGAAAAATATTCTCACTATGAAAAAGGATGAT
TTAGCTATTTTCAGAAGGAATAATATTGGATTCATATTTCAAGATTTTAATCTTTTAGACAGCTTAACAGTGAAAGAAAA
CATAGGATTTCCATTAACCGTAGATAGAGTAAAACCAAAAATCGTAGAAGAGAAGGTCAACAAGTTAATAGAATATTTTG
GTTTAAAGGATATTGCTAATAGCTATCCATATAACATCTCAGGTGGCCAAAAACAAAGAGTGGCAGAGGCTAGAGCCTTA
ATCAAGGAACCCAAAATAATATTAGCCGATGAACCTACAGGAAATTTAGATTCTAAGTCATCGATGAACATTATGGAAAG
TTTTAAAAAGATTAATGAAGAAAAAAATTCAACTATAGTTATGGTAACCCATGATCCTTTTGCAGCGTCCTTTTGTAAGA
GAATTATATTTATAAAGGATGGAACCATTAAGCTTGAGATAAACTCTAACGGAAACAGGAAGGAGTTTTTTGACAAGGTA
ATAGAGGCTCAACTAGTGATAGGAGGGCAAGAATAA

Protein sequence : 
MKVLESKKVTKVYDAFKGAQAIKALNDISFKVEEKEFLGVMGPSGSGKTTLLNILAGIDKATSGEIFIDGKNILTMKKDD
LAIFRRNNIGFIFQDFNLLDSLTVKENIGFPLTVDRVKPKIVEEKVNKLIEYFGLKDIANSYPYNISGGQKQRVAEARAL
IKEPKIILADEPTGNLDSKSSMNIMESFKKINEEKNSTIVMVTHDPFAASFCKRIIFIKDGTIKLEINSNGNRKEFFDKV
IEAQLVIGGQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-30 41
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_1122 YP_003842644.1 ABC transporter CP001581.1.gene798.p Protein 5e-42 47
Clocel_1122 YP_003842644.1 ABC transporter CP001581.1.gene598.p Protein 3e-40 45
Clocel_1122 YP_003842644.1 ABC transporter NC_012469.1.7686878. Protein 5e-39 42
Clocel_1122 YP_003842644.1 ABC transporter NC_008702.1.4606598. Protein 3e-35 41