Gene Information

Name : Clocel_0087 (Clocel_0087)
Accession : YP_003841640.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 152392 - 152865 bp
Length : 474 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: cac:CAC3531 IS605/IS200-like transposase

DNA sequence :
ATGGATAATAGTAGTTTAGCACATAGTAAATGGAATTGTAAATATCACATAGTCTTCGCACCAAAGTATAGGAGACAAAT
CATATATGGAAAAATAAAAGCGGATATAGGGGTAATACTTAGAAAGTTATGTGAACATAAAGGAGTAGAAATTATTGAAG
CAAATGCATGTAAGGATCATATACATATGCTTGTAAGTATACCTCCGAAGTTAAGTGTCTCTCAGTTTATGGGGTATTTG
AAAGGTAAGAGTTCATTGATGATTTTTGACAGACATGCAAATTTGAAATATAAATATGGGAATAGGCAATTTTGGTGTAA
AGGCTATTACGTTGATACAGTTGGAAGAAACAAAAAGATAATAGAAGAATACATAAAGAATCAAATACAGGAAGATTTAG
CATATGAACAAATGAGCTTGAAAGAATTTATTGACCCGTTTACGGGTGAATCAGTAAACAAAGGCAAAAAATAA

Protein sequence :
MDNSSLAHSKWNCKYHIVFAPKYRRQIIYGKIKADIGVILRKLCEHKGVEIIEANACKDHIHMLVSIPPKLSVSQFMGYL
KGKSSLMIFDRHANLKYKYGNRQFWCKGYYVDTVGRNKKIIEEYIKNQIQEDLAYEQMSLKEFIDPFTGESVNKGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 7e-55 76
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-48 71
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-38 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 7e-39 64
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 6e-45 63