Gene Information

Name : Clocel_1007 (Clocel_1007)
Accession : YP_003842535.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : transcriptional regulator, XRE family
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1232025 - 1232225 bp
Length : 201 bp
Strand : +
Note : KEGG: swo:Swol_2033 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
GTGAAGGAAATGAAGAATAAAGTTAAAGAGTTTAGAAAGCAACTAAAATTAACTCAAGATGAATTAGCACAAGAACTTGG
TGTAACACGACAAACGATTAATGCAATTGAAAACAACAAATATAATCCAACCCTTGAATTAGCTCTTAAAATGAGTAGGT
TTTTAGGAGTATCTACTGAATCATTATTTATACTTGATTAG

Protein sequence :
MKEMKNKVKEFRKQLKLTQDELAQELGVTRQTINAIENNKYNPTLELALKMSRFLGVSTESLFILD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-13 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-08 52
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-08 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_1007 YP_003842535.1 transcriptional regulator, XRE family VFG2175 Protein 4e-09 52
Clocel_1007 YP_003842535.1 transcriptional regulator, XRE family VFG2168 Protein 4e-09 52